Gene SO_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3100 
Symbol 
ID1170789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3226460 
End bp3226906 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content45% 
IMG OID637344905 
Producthypothetical protein 
Protein accessionNP_718662 
Protein GI24374619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTCTTA AGCATTTATT GCCTAAAGTT AATCCATCTT TCACTCACAC TATAATTCTT 
ATGGCAAAAG TCATTGGACT TGGTGGTATT TTTTTCAAAA GTACTGATCC TGTAGCCTTA
GCAACTTGGT ACAAAACTCA CCTTGAAATC CCCATCGAAA ACTGGGGGGG CGCGGCGTTT
TATCACCGCG ATAAACCCGT TCCCGGTTAC CATATATGGA CACCGTTTGA CCACAACACC
ACCTATTTTG CCCCGACGGA TAAAAGCTTT ATGGTGAACT TTATCGTGGA CAACCTTGCG
CAGGCCTTGC TTCAAGTTAC GCAGGGTGGC GGTAAGCAAA TCGGCGATAT TGAAGACTCT
GAATTTGGCC GTTTTGGCTG GTTTATCGAC CCCGATGGTA ATAAAGTCGA ATTATGGCAA
CCAAGCACAA CTCCGCCCGC AAACTAA
 
Protein sequence
MCLKHLLPKV NPSFTHTIIL MAKVIGLGGI FFKSTDPVAL ATWYKTHLEI PIENWGGAAF 
YHRDKPVPGY HIWTPFDHNT TYFAPTDKSF MVNFIVDNLA QALLQVTQGG GKQIGDIEDS
EFGRFGWFID PDGNKVELWQ PSTTPPAN