| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3099 |
|---|
| Symbol | |
|---|
| ID | 1170788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3225094 |
|---|
| End bp | 3226416 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637344904 |
|---|
| Product | long-chain fatty acid transport protein, putative |
|---|
| Protein accession | NP_718661 |
|---|
| Protein GI | 24374618 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT TCAACAAGAC GCTGCTTACT GTTGCCATCG CACTGGCTAG CTCACAAACT
TTCGCTTCAG GTTTCCAATT AAACAGCCAA TCCGCCACGG GTATGGGTCG TGCTTTTGCA
GGGGATGCGG TTATTGCCGA TAACGCCACT GTTTTGTCAC GTAACCCTGC TGCAATGGCA
TTATTCGATA AAGATGCGAT TTCTTTCGGC TTAACCTATG CCGATATTAC CGTTGATGTT
AAAGACGTTA ACTTTAACTT ACCTAATGGT GCCGTTGACT TAGGCAGCAT CGACGATGCG
GGTAGCTCTA AAGTTATCCC TAATATTTTT TATATTCACC CAATCGACGA TAAATTCGCC
GTCGGTTTTG CAGCCTTCTC TAACTTTGGA ACTGGTACCG ATGCCAGCTC ACTGTCTAAG
AATTTACCAA AAGGCTCACC AGCACCTTAT GATCTGCTTG GCGAAACAGA AGTAACCACG
GTTAACTTTA ACGCCAGCGT GTCTTATCGC ATCAATGATA TATTCAGCAT CGGTGCAGGT
GTAGATGCCA TCTACGGTGA AGGTCGTTTA ACCCGTAACG CAAGCACTAC ACCTCTCGTT
GATGTGGATG CTGACGGCTG GGCCTTCGGT GGTATCTTGG GTGCCACAGT TGAGTTAGAT
AAAGATAACC GCTTCGGTAT CAGCTACCGT TTCAGCCCGA CAGTGAATGT TGAAGGGGAT
ATTAACACCA TCAGCACTAA AGACTTATCT GCTGCTGGCT TAGGTTCAAA AACAGCCCTA
GCAACAAACT TTGACAGCTT AGATGTACCA CTTGCAGATA TTTTCCAAGT TGCAGGCTTC
CATCAAATCA CGCCTAAGTT TGCGCTGCAC TATACTGCGC AATACACCCA GTGGAGCAAA
TTCGACCAAA TCACGGCTAA AGATGGCGTA GCGACGATTA TCCCAGGTCA AGCGGGTGCT
GGTATCAAGC TTCCAGCAGG TGATATCGCC CTTAAAGAAT ACCAATGGAA AGATTCATGG
TTATTCAGCC TAGGTGGCAC TTACACCATT AACGAACAAT TTACTGTTCG TGCAGGTTAT
ATGCATGACC AAGGCGTTGT GGACGAAATT AGCTCAATTT CATTCCCTGA CTCAGATCGC
AACTGGTACA CAGCAGGTAT GAGCTATCAT ATCAACCCAC AAAACACCGT TGACTTTGGT
ATCGCCTTTA TCAAAGGTGA AGAAGTGCAC TTGATCGAAA ACAGTGCCAT TACAGGTCCT
GTAAACGCGA TAACTGAATC AAGCGGTATG TACTACTCTG TACAGTACAG CTACCAGTTC
TAA
|
|---|
| Protein sequence | MKSFNKTLLT VAIALASSQT FASGFQLNSQ SATGMGRAFA GDAVIADNAT VLSRNPAAMA
LFDKDAISFG LTYADITVDV KDVNFNLPNG AVDLGSIDDA GSSKVIPNIF YIHPIDDKFA
VGFAAFSNFG TGTDASSLSK NLPKGSPAPY DLLGETEVTT VNFNASVSYR INDIFSIGAG
VDAIYGEGRL TRNASTTPLV DVDADGWAFG GILGATVELD KDNRFGISYR FSPTVNVEGD
INTISTKDLS AAGLGSKTAL ATNFDSLDVP LADIFQVAGF HQITPKFALH YTAQYTQWSK
FDQITAKDGV ATIIPGQAGA GIKLPAGDIA LKEYQWKDSW LFSLGGTYTI NEQFTVRAGY
MHDQGVVDEI SSISFPDSDR NWYTAGMSYH INPQNTVDFG IAFIKGEEVH LIENSAITGP
VNAITESSGM YYSVQYSYQF
|
|---|
| |