Gene SO_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3093 
Symbol 
ID1170778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3217109 
End bp3218125 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content50% 
IMG OID637344895 
Productvon Willebrand factor type A domain-containing protein 
Protein accessionNP_718656 
Protein GI24374613 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACTG TCGTATGGCC CTTGGCATTG ATTTTACTGC CTTTACCTTT AATTTTTTGG 
CGGCGTCAAA CGCTGCACGC CGAAGGTGGG CGCCTGCAAC TGCCCGGTAT CAGTCAAACG 
AGCAAGGCAA CCTTAGCCAC CCAAACTCGT CAAACCCGTA AACGCTATTG GTTAATGTGG 
TGCTTGTTAG TACTTGCTAT CGCCCGTCCG CAATGGCTTG GCGATCCAAT TGAGCTCCCT 
AGCCAAGGGC GCGATCTCAT GCTGGCGGTG GATTTATCCG GCAGTATGCA AATTGAAGAT 
ATGGTGATCG ACGGCAAAGT GGTCGACCGC TTTACCCTCA TCCAACACGT GGTCAGTGAG 
TTTATTGAAC GCCGTAAAGG CGACCGCATC GGTTTGATTT TATTCGCCGA TCATGCCTAT 
TTACAGGCAC CACTCACCCA AGATAGACGT TCCGTGGCCC AGTTTTTAAA GGAGGCCCAA 
ATCGGTCTCG TCGGCAAACA GACGGCTATC GGCGAGTCGA TTGCACTGGC GGTAAAACGC 
TTCGATAAAA TGGATGAAAG TAACAGGGTT TTAGTTCTAT TGACCGATGG TTCAAATAAC 
GCCGGTAATA TCGAGCCACA GCAAGCGGCC CAAATCGCAG CAAACCGCAA AGTAACCATT 
TATACCGTAG GTGTCGGCGC CGATGTGATG GAAAGACGCA CCCTCTTTGG TCGTGAACGG 
GTTAATCCGT CAATGGATCT GGATGAAAAC CAACTACAGC AGATTGCCGA TGCCACCCAC 
GGCCGCTATT TCCGCGCCCG TAATAGTGAG GAGCTAGAAC AGATTTATCA AGAAATCGAT 
AAACTTGAAC CCGTTAGCCG CGATCAACTC AGTTATCGCC CTCAAGCGGA ACTATTTTAC 
TGGCCGCTCG CGTTGGCACT GCTCACCAGT CTCTGGATTG CACTAAGCCA GTTACCGTTT 
TTTACTCGCG CTAAAAACCT TGTTTTATCA GCCACACCGC GGGGGAATGT CCGTTAA
 
Protein sequence
MLTVVWPLAL ILLPLPLIFW RRQTLHAEGG RLQLPGISQT SKATLATQTR QTRKRYWLMW 
CLLVLAIARP QWLGDPIELP SQGRDLMLAV DLSGSMQIED MVIDGKVVDR FTLIQHVVSE 
FIERRKGDRI GLILFADHAY LQAPLTQDRR SVAQFLKEAQ IGLVGKQTAI GESIALAVKR 
FDKMDESNRV LVLLTDGSNN AGNIEPQQAA QIAANRKVTI YTVGVGADVM ERRTLFGRER 
VNPSMDLDEN QLQQIADATH GRYFRARNSE ELEQIYQEID KLEPVSRDQL SYRPQAELFY 
WPLALALLTS LWIALSQLPF FTRAKNLVLS ATPRGNVR