Gene SO_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3091 
Symbol 
ID1170776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3215463 
End bp3216446 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content52% 
IMG OID637344893 
Producthypothetical protein 
Protein accessionNP_718654 
Protein GI24374611 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACA GTGCGCTAAA CGCATCCCTA AATAATGATG TTGTACAACA TGGCTTACCT 
CTTAATGGTT TGCCCTTGTT TGCCGATGGG TTGCATTTAA CCGAGAAGGA ACTGCTCGCC 
TGCCAGACGA TTGCGCGGGC CATTCCTGAG CGTCACAGCC GAGCACGCGC CAATCTGGCG 
GGTCATCGCA GCAGTCTAAT CAAGGGCCGT GGCATGGAGT TTGCCGAAGT GCGCCATTAC 
CAGCAAGGTG ACGATGTCCG CACAATTGAT TGGCGTGTTA CCGCACGCAC AGGGCAAACC 
CACACCAAAC TCTTTATCGA AGAGCGCGAG CGCCCTATTC TGCTGCTGCT CGATTTAAGC 
CAGAGTCTGT ATTTTGGCTC GAGTTTGCTG TTACAGTCAG TTCAAGCTGG GCATCTCGCC 
ACCACGCTTG GTTGGAATGC TATCAATCAC GGCGATAGGC TCGGGGCCTT AATCGCCTGT 
GAGTCGGAGC ATCTTGAATT AAAGCCCCGC AGTCGAAGGC AAGGTATTTT GCAGCTGATC 
TCAGGACTAT GCCGAGTGCA CGAGCAGCAA CTCAATCAAC TTGGCAGTCA TCCGCGCGAT 
CCAGACCATA TATTGCGTGC CTGCCAGCGT TTGCAACGTA TCGCTAAGCC CGGCTCATTG 
ATTTGGATTA TCACCGATGG CAGCCATTTT ACACCGCAAT GTATCGCGCC GCTGACAGAG 
CTCAAGCGCC ATTGCGATAT TGGCGCGTAT TTGATAACTG ACCCTTTAAG GCAAGGTAGC 
CTGAACTTAC CTAAACAGTT CAGTTTACCT GTCCGAGATG CAGAGCAAGA CTTAGTGTTG 
ACTCACCACA GCTATCAGGC ATGGCTCGCG CTGCAACACC AGCAGCAGAA TGACTTTATC 
GCCATGATGC AAAAGCTAAG AGTACACACC CAATTTATCG ATGCAGGCCG CCCCCTTGCA 
GAGCAATTAG CATTACTGCA ATAG
 
Protein sequence
MNDSALNASL NNDVVQHGLP LNGLPLFADG LHLTEKELLA CQTIARAIPE RHSRARANLA 
GHRSSLIKGR GMEFAEVRHY QQGDDVRTID WRVTARTGQT HTKLFIEERE RPILLLLDLS 
QSLYFGSSLL LQSVQAGHLA TTLGWNAINH GDRLGALIAC ESEHLELKPR SRRQGILQLI 
SGLCRVHEQQ LNQLGSHPRD PDHILRACQR LQRIAKPGSL IWIITDGSHF TPQCIAPLTE 
LKRHCDIGAY LITDPLRQGS LNLPKQFSLP VRDAEQDLVL THHSYQAWLA LQHQQQNDFI 
AMMQKLRVHT QFIDAGRPLA EQLALLQ