Gene SO_3081 details

Gene Information

• Locus tag: SO_3081
• ID: 1170767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3200713
• End bp: 3201243
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637344884
• Product: hypothetical protein
• Protein accession: NP_718644
• Protein GI: 24374601
• COG category: [S] Function unknown
• COG ID: [COG2840] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG ACGATGACAA AGAAGGCATG GCGATGTTTT CGGCGCTAAT CGAGGGGATA 
AAACCTATCA CCCAAGATAA GCGGCATTTT CGCACGCCCC TAAAAACCAA ACAGGAAATT 
GAACTAAAAG AGCAGCAATT GCATGCTAAC AGTTATTTCT CAGATACTTA TCAACCGCTA 
CTCCCCGTTC AAGGGCCGAT GCGTTGGCTC GATGAAGGGG TTGATAGTTT AGAGCTTAAA 
CGCTTAAGAC GTGGCGATTA TCAGCCGGAT TTATTGCTGG ATTTACACGG TTACCGCCAA 
TCAGAGGCCA AGCTCGAATT AGCTGCGCTC ATTCAAGCCT GTGTAAAACA GCAAAGCCAA 
TGCTGCTGCG TGATGCACGG TTATGGCACC GGCATACTTA AACAGCAGGT GCCTATGTGG 
CTGGTGCAAC ATCCGATGGT TAAGGCCTTT CACCAAGCGC CTAAAGAATG GGGTGGCGAT 
GCCGCGTTGC TGGTACTGAT TGATATTGGC GACCAGCCCC ATAGACGTTA A 

 

Protein sequence

MNKDDDKEGM AMFSALIEGI KPITQDKRHF RTPLKTKQEI ELKEQQLHAN SYFSDTYQPL 
LPVQGPMRWL DEGVDSLELK RLRRGDYQPD LLLDLHGYRQ SEAKLELAAL IQACVKQQSQ 
CCCVMHGYGT GILKQQVPMW LVQHPMVKAF HQAPKEWGGD AALLVLIDIG DQPHRR