Gene SO_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3075 
Symbol 
ID1170760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3195048 
End bp3195659 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content51% 
IMG OID637344878 
ProductRNA methyltransferase 
Protein accessionNP_718639 
Protein GI24374596 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGAGTT CATCCACGAC GACTTTGGTT GACGCAGTGG CATCACCACA AGCTCAGCAA 
GCGGTTTATA TCGGTTTAGT GAATCCCAAA ACGCCCACCA ATGTGGGCGG CATTATGCGC 
GCTTCGGGCT GTTATGGTGT CGATGCCGTG TTCTACACGG GCAAACGCTA TGAATATGCC 
GCCCGTGGGC CGCAGCAATA TAATGCTGAT ACGCAGAGCG CCGCTGAGCG CATTCCGTTA 
ACTGGAGTCA CCTCGTTACT TGATGCGATT CCTGCTGGTA CTCAACTGGT TTGCGTGGAT 
TTAGTCTTGG GGGCGACGCC TTTGCCGGAG TTTGTCCATC CCGAAAGAGC CTTTTATGTG 
TTTGGGCCTG AGGATGGCAC TATTGGCCAA GAGATTATCG ATAGGGCTGA TGCCGTTGTG 
TATGTGCCAA CTGTTGGTTG CATGAATCTG GCTGCGTCGG TCAATGTACT GCTGTACGAT 
AGATTAGCGA AAACCTATCG CAAACAGGCG ACCAATGAAG CTGAGTTTGA TGGAGATGCC 
TTGATCCGCA CAAGTCGAGA CAACAATAAT CGTACCCGCG TTAAAACCAC TAAGCGTGAG 
TCTTCGAAGT AG
 
Protein sequence
MMSSSTTTLV DAVASPQAQQ AVYIGLVNPK TPTNVGGIMR ASGCYGVDAV FYTGKRYEYA 
ARGPQQYNAD TQSAAERIPL TGVTSLLDAI PAGTQLVCVD LVLGATPLPE FVHPERAFYV 
FGPEDGTIGQ EIIDRADAVV YVPTVGCMNL AASVNVLLYD RLAKTYRKQA TNEAEFDGDA 
LIRTSRDNNN RTRVKTTKRE SSK