| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3071 |
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| Symbol | pdxB |
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| ID | 1170757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3190127 |
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| End bp | 3191257 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344875 |
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| Product | erythronate-4-phosphate dehydrogenase |
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| Protein accession | NP_718635 |
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| Protein GI | 24374592 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG TTGTCGATGA AAATATGCCC TATGTCGAAC CCTTATTCGG GGATCTCGGC
GAGATAATTC CAGTCAATGG CCGCACATTA ACGCCTGAGC AGGTGCAAGA TGCCGATGTG
CTGCTGGTTC GTTCCGTTAC CCGAGTCAAT GCTGCACTGT TAGAGGCAAA TCAAAAGCTT
AAGTTTGTGG GTAGCGCGAC CATTGGCACA GATCATGTGG ATTTAGCTTA CCTTGCCACT
CGAGGCATTG TGTTTTCAAA TGCGCCAGGT TGTAACGCAA CAGCGGTGGG TGAATTTGCC
TTTATTGCCA TGCTAGAACT GGCGGCGCGG TTTAATTCGC CGCTCAGGGG TAAGGTCGTG
GGGATTGTTG GTGCGGGCAA TACTGGCAGT GCGACAGCCA AATGCCTTGA AGCCTTCGGT
ATTAAAGTAT TGCTCAATGA TCCCATCAAA GAGGCCGAGG GCGATCCGCG CGATTTTGTG
AGCCTTGAAA CCTTATTACA AGAGGCAGAT ATCATCAGCT TACATGTGCC AATCACCCGC
ACTGGCGAGC ATAAAACGCT GCATTTATTT GATGAGGCGC GCCTAATGAG CCTCAAAGCG
AATATCTGGC TAATTAATTG TTGTCGTGGT GACGTCATTG ATAATCAAGC ATTAATCAAA
GTTAAGCAGC AAAGGGATGA CCTTAAATTA GTGCTCGACG TATGGGAAGG GGAGCCGAAT
CCCATGCCGG AGTTAGTGCC TTTTGCTGAG TTTGCGACCC CGCATATCGC CGGTTACAGC
TTAGAAGGTA AGGCCCGTGG CACTTTTATG CTGTACCAAA AGTTATGTGA ATTGTTAGCT
ATTCCTGCCA CTAAAGGCTT ATCAGACTTA TTGCCCCGTT TCAATATCAA AGCCGTTGAA
CTCGAACAGC TTCCCGATGA AAAAGCCTTA TTACAGCTCG CAAGATTCGT CTACGACCTA
CGAGATGACG ATGCTGTTTT CCGAAATTGC TTTGCAAAAG AAAATGGCTT CGACATTATG
AGAAAAAATC ATAAACATCG ACGTGAATTT AGTGCATTGG CGCTGGCTTA TCGCGGTCAA
TCTGAGGTAG ATTGGTTGTC CAATTTAGGT TTTTCAGGAG TCGGTCGGTA A
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| Protein sequence | MKIVVDENMP YVEPLFGDLG EIIPVNGRTL TPEQVQDADV LLVRSVTRVN AALLEANQKL
KFVGSATIGT DHVDLAYLAT RGIVFSNAPG CNATAVGEFA FIAMLELAAR FNSPLRGKVV
GIVGAGNTGS ATAKCLEAFG IKVLLNDPIK EAEGDPRDFV SLETLLQEAD IISLHVPITR
TGEHKTLHLF DEARLMSLKA NIWLINCCRG DVIDNQALIK VKQQRDDLKL VLDVWEGEPN
PMPELVPFAE FATPHIAGYS LEGKARGTFM LYQKLCELLA IPATKGLSDL LPRFNIKAVE
LEQLPDEKAL LQLARFVYDL RDDDAVFRNC FAKENGFDIM RKNHKHRREF SALALAYRGQ
SEVDWLSNLG FSGVGR
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