| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3063 |
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| Symbol | |
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| ID | 1170749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3178629 |
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| End bp | 3180116 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344868 |
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| Product | sodium:alanine symporter family protein |
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| Protein accession | NP_718628 |
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| Protein GI | 24374585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGA TTGTTAATGC GGTCAACAAT ATCGTTTGGA GCCCCGCGCT TGTATATCTT
TGCCTTGGTG TGGGACTCTT TTTCTCCCTG CGCTCACGTT TTTTACAGTT ACGCCATTTA
CCCGAGATGA TCCGTTTAAT GTTTGATGGT AAGAGCACCG ATGCAGGTGT ATCTTCCTTT
CAGGCATTAG CCATGACCTT AGCCGGTCGG GTGGGTACAG GGAATATTGC CGGCGTTGCA
ACTGCGATTA CCTTTGGTGG CCCCGGCGCC CTATTTTGGA TGTGGATGGT GGCGTTTCTA
GGCGCGAGCT CCGCATTTGT GGAATCAACC TTAGGCCAAG TCTATAAAGA AAAAATCAAT
GGTGAATACC GCGGCGGCCC AGCCTTCTAT ATTGAAAAAG GTTTAGGCAT GAAGTGGTAC
GCATGGACGT TTGCCATTGC AACCATTTTT GCCTGTGGGG TGTTACTGCC CGGGGTGCAA
GCCAACTCCA TTGGCGCCAG CTTAAAAACC GCCTTTGATA TCGACCCTAA TGTTACCGCG
GCCGTGTTAG CCATGTTACT CGGGTTTATT ATTTTCGGCG GAGTAAAACG CATCGCCAAT
TTTGCCACTT TGGTGGTGCC CTTTATGGCG CTCGGTTATA TCATCGTCGC CTGCGTGATT
ATCGCCCTTA ATATTGATCA GTTACCCGGG ATTTTATGGT TAATTATCAA AAGCGCCTTT
GGCTTTGATG CCGGTTTTGG CGCGATTTTA GGCCTCGCCA TTATGTGGGG GGTTAAACGC
GGGGTGTATT CTAACGAGGC AGGACAAGGT ACCGGCCCAC ATGCCTCCTC GGCGGCGGCG
GTGACCCATC CAGCCAAGCA AGGCTTAGTG CAAGCTTTCT CCGTTTACAT TGATACCCTA
TTTGTGTGTT CTGCCACCGG TTTTATGTTA CTTATCACCG GCCTTTATAA CGTGCAGGGG
CCAGATGGCG CCGCGCTCTA TACCGGTATT GCAGGGGTTG CTGCTGGCTC AGGTTATGTA
CAAACCGCGA TGGAAAGTAT GATGCCAGGC TTTGGTAATA TGTTTGTCGC CATTGCCCTG
TTCTTCTTTG CCTTCACCAC CATTGTTGCC TATTACTATA TTGCCGAAAC CAACATTGCC
TATATCAATC GCAAGGTGAA TCGCCCTTGG CTGACTGTCA TGCTTAAAGT CATCATCATG
GCATCGACCG TCTATGGCAC CGTAAAAACC GCTGACTTAG CTTGGGGCAT GGGTGATATT
GGTGTGGGAA TTATGGCTTG GCTAAACATT ATTGCCATTA TTCTGCTGCA AAAAGTCGCC
TTTACTTGTT TGAAAGATTA TGAGTCTCAA CAAAAACAAG GAATTGAGCC GCAATTTGAT
CCTGAAAAAC TCGGGATCCC CCATGCTGAC TATTGGGTTG AGCGTAAAAA TGCGCAGGAT
GAACCTATGT CTATCCGCCA CTCAATCGAA AGTAAAAAAC GAGTCTAA
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| Protein sequence | MNEIVNAVNN IVWSPALVYL CLGVGLFFSL RSRFLQLRHL PEMIRLMFDG KSTDAGVSSF
QALAMTLAGR VGTGNIAGVA TAITFGGPGA LFWMWMVAFL GASSAFVEST LGQVYKEKIN
GEYRGGPAFY IEKGLGMKWY AWTFAIATIF ACGVLLPGVQ ANSIGASLKT AFDIDPNVTA
AVLAMLLGFI IFGGVKRIAN FATLVVPFMA LGYIIVACVI IALNIDQLPG ILWLIIKSAF
GFDAGFGAIL GLAIMWGVKR GVYSNEAGQG TGPHASSAAA VTHPAKQGLV QAFSVYIDTL
FVCSATGFML LITGLYNVQG PDGAALYTGI AGVAAGSGYV QTAMESMMPG FGNMFVAIAL
FFFAFTTIVA YYYIAETNIA YINRKVNRPW LTVMLKVIIM ASTVYGTVKT ADLAWGMGDI
GVGIMAWLNI IAIILLQKVA FTCLKDYESQ QKQGIEPQFD PEKLGIPHAD YWVERKNAQD
EPMSIRHSIE SKKRV
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