| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3060 |
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| Symbol | |
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| ID | 1170746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3174321 |
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| End bp | 3175490 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344865 |
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| Product | outer membrane porin, putative |
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| Protein accession | NP_718625 |
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| Protein GI | 24374582 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AATTGCTTGC AGTGATGATC CCCGCGGTGT TGCTCACTGG TACAACTCAA
GCGGTCGAGC TGTATAACGA TCAAACCAAT AGCGTCAATA TGATGGGGTG GTTAGGCTTT
GCGGCGTTAA ATGATGGTCA TGAAACTTCG GTTATCGATA ACTTTTCTCG GGTGGGCTTC
CGTTTCGATC GTCAAGAGAA AAACGGTTGG CGTTCGTTTG CCCACACGGA ATGGGGCATT
AACATGGTCA CCAGCGACGA TGGCCTGATT TATACCCAAG GCCAAGGTGG CGGTCAATTA
TCGGCATCAA AAACCTCAGA TTTCCTGTTC AACCGTTTAG GTTATGTCGG CATGGCACAC
GAAAAGTGGG GTACCCTCAG CTTTGGTAAG CAATGGGGTG CTTACTATGA CGTGGCTTAT
ACTACTGACG TGCTCAATGC GTTTACTGGC TGGTCTGTCG GAGCTTACAC CTTCGGTGAT
GGTGGTTTGA CGGGGGCGGG TCGTGCTGAC GCGGCGCTGC AATACCGTAA TACCTTTGGC
AATCTACATA TCGCTGTGCA ATACGCTTCT AAGCAAAATA GCGATGTAGC GCTTTATGAT
AACCAAGGCC ATGCCTTAAA TGATGGTTCA GAGCTGAGCT TCGACCCTAG CTATGGTGCG
AGTGCCACTT ACTACATTAC TGATAAATTT AAGGTGTTAG CGGGTTTTAA CCGTGGCGAC
TTTACTGGAA ACCTCGCGGG TAAAGACGTA GATAATACCA ATCAAATCAT GGGTATTGGT
GCGCAGTATG GTAGTTTCTA TCAGTATGCG CCAGGTCGTG ATGCCGATGG ATTATATGTT
GGTTTTAACG CCCATAAGAG TGAGCAAAAC GAGTTAGTGG GTGGTGAGCT CTACGATTCT
ACAGGTGCTG AATTTATTGT GGCTTATCAA TATGACAATG GCTTTGTGCC GAGTGTATTG
CTGACCTATC AAGATCTTGA TACTGATGAA AACACGGCAA TTCAAGGTAA ATGGACCCGC
CAGTTTGCCG TACTTGGTCT GCATTATCGT TATAGCCGCG ACACCATTAT GTACGCCGAA
GCCAAGATTG ACTTCAGCAA CATGGACGAT AAGGCCTATG AAGATCTGCA AGACAATAAC
TACGCCGTTG GTATTCGTTA TTTCTTCTAA
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| Protein sequence | MKKKLLAVMI PAVLLTGTTQ AVELYNDQTN SVNMMGWLGF AALNDGHETS VIDNFSRVGF
RFDRQEKNGW RSFAHTEWGI NMVTSDDGLI YTQGQGGGQL SASKTSDFLF NRLGYVGMAH
EKWGTLSFGK QWGAYYDVAY TTDVLNAFTG WSVGAYTFGD GGLTGAGRAD AALQYRNTFG
NLHIAVQYAS KQNSDVALYD NQGHALNDGS ELSFDPSYGA SATYYITDKF KVLAGFNRGD
FTGNLAGKDV DNTNQIMGIG AQYGSFYQYA PGRDADGLYV GFNAHKSEQN ELVGGELYDS
TGAEFIVAYQ YDNGFVPSVL LTYQDLDTDE NTAIQGKWTR QFAVLGLHYR YSRDTIMYAE
AKIDFSNMDD KAYEDLQDNN YAVGIRYFF
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