Gene SO_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3054 
Symbol 
ID1170740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3166564 
End bp3167208 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content47% 
IMG OID637344859 
Productmetallo-beta-lactamase family protein 
Protein accessionNP_718619 
Protein GI24374576 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACC AAATTATTCC TGTGACACCT TTCCAGCAGA ATTGCAGCTT GATCTGGTGT 
GAAAAAACCA AGCGTGCCGC GGTTGTCGAT CCGGGAGGGA ATGTCGACCG TATTTTAAGG 
GAAATTGCCA AATTGGGACT TACCCTTGAT AAAGTCCTGT TGACCCACGG TCATATCGAT 
CATGTTGGCG GCGCTAAGCT ATTAGCACAA CAAGCGAATG TGCCGATAAT TGGTCCGCAT 
GAGGCGGATA AGTTTTGGAT TGAAAATCTG CCTAAACAGA GCCAAAACTT TGGTTTTCCC 
CACTGTGATG CCTTTGAGCC TGATCAATAT CTGCATGATG GCAATACAGT TACTGTGGGG 
GAGCAAAGCT TAACTGTACT GCATTGCCCC GGCCATACAC CTGGACACGT GGCATTTTAC 
TCGGCCTCAT CCAAGCTTGC TTGGGTCGGG GATATTCTGT TTAGAAGTTC GATAGGACGC 
ACTGATTTTC CACAGTCTAA TCATCAGAGC TTGATCCATT CCATCACCTC TAAACTCTGG 
CCTTTAGGTG CTGATGTGGA ATTTATTCCC GGTCATGGCC CTATATCCAC CTTTGGTGAA 
GAGCGTGAGC ACAATCCCTT TGTGGCGGAT CAACTATTGC TATAA
 
Protein sequence
MKYQIIPVTP FQQNCSLIWC EKTKRAAVVD PGGNVDRILR EIAKLGLTLD KVLLTHGHID 
HVGGAKLLAQ QANVPIIGPH EADKFWIENL PKQSQNFGFP HCDAFEPDQY LHDGNTVTVG 
EQSLTVLHCP GHTPGHVAFY SASSKLAWVG DILFRSSIGR TDFPQSNHQS LIHSITSKLW 
PLGADVEFIP GHGPISTFGE EREHNPFVAD QLLL