Gene SO_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3049 
Symbol 
ID1170735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3162047 
End bp3162541 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content52% 
IMG OID637344854 
Productisoquinoline 1-oxidoreductase, alpha subunit, putative 
Protein accessionNP_718614 
Protein GI24374571 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAC CATCCTCGGC GGCGAAGGAC AAAAGTCTGA CAACGCCATC CCTAAACCTG 
ACCATTAACG GCAGATCGTT TACCTTAAAT GCGGATCCCA ATATGCCCAT CCTCTGGGCG
TTACGGGATA TTTTAGGCTT AACTGGCACT AAGTATGGCT GCGGCGCTGG GCTCTGTGGT
GCTTGTACTG TGCATGTAGA TGGCCAGCCA GTGCGGGCTT GTTTAACCAG CGTGTCGCAG
GCGCAAGGTA AGCAGTTAAC CACGATTGAA GGGCTGGATA ATCAAAAGCT TAAAAATGCT
TGGGCTGAGC ACAATGTGCC CCAGTGTGGT TATTGTCAGG CGGGGCAACT AATGTCGGCA
GCGGCCTTAG TCACTCAGCA TCCAAAACCG TCGGCTGAAC AAATAGATGC TGCTATGTCG
GGCAATTTGT GTCGCTGCGG TACCTATCCT CGCATCAAAG CAGCGCTGCA AAGCTATGCC
AAGCAGGAGG GCTAA
 
Protein sequence
MAIPSSAAKD KSLTTPSLNL TINGRSFTLN ADPNMPILWA LRDILGLTGT KYGCGAGLCG 
ACTVHVDGQP VRACLTSVSQ AQGKQLTTIE GLDNQKLKNA WAEHNVPQCG YCQAGQLMSA
AALVTQHPKP SAEQIDAAMS GNLCRCGTYP RIKAALQSYA KQEG