Gene SO_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3015 
Symbol 
ID1170703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3127031 
End bp3127819 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID637344825 
Producthypothetical protein 
Protein accessionNP_718583 
Protein GI24374540 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGCA CGCAACAAAG TTTACCCTTA GCCGTTGTTC GTGGTCAGGC GATGACCGAA 
ATGCCGCAGG ATTTGTTTAT TCCACCTGAG GCGCTAGAAG TGTTTTTAGA GTCCTTTGAA
GGGCCGCTAG ATTTACTTTT ATACCTGATC CGTAAGCAAA AATTAGATGT CGTCGATTTA
CCCATTTCGC AGATCACCGC GCAATATTTA GAATATATCG CGATGCTAAC CCAAGCGCGA
ATCGAACTGG CCTCGGATTA TTTAGTCATG GCGGCAACAC TTGCCGAGAT TAAATCCCGT
CTGCTGCTGC CGCGTATGGT GGCGGAAGAT GAAGTGGAGG AAGATCCGCG TGCGCAGTTG
ATCCGTCAAT TGAAAGCCTA TGAGGTTATA AAAGAAGCAT CACAAAAAAT TGATGATTTA
CCAAGGCTTG AGCGCGATGT GTTTCAAGCA ACCGCGGCCC CATCACCGAA TATTAAACCC
TTGGTGATCC CGCCAGATGT ATCGTTATTC GAAATTGCCC GTGCCTTTGG TGATGTGCTT
AAGCGTATCG ATGCCTATGA AGATCATCAT GTTAAGCGTG AACAGTTATC GACCCGTGAG
CGCATGAGTC AAATTTTAGC CATGCTCAAT AGCGAGGATT TTACCCCATT TGAGCGTTTA
TTCAGTGTCG AAGAAGGTCG CGCCGGGGTG GTGGTGACCT TTTTAGCGCT GATGGAACTG
GTCAAAGAAT TATTAGTGGA ATTGTACCAA ACAGAGCCGT TTTCAACTAT CTACGTAAAG
GCCTATTAA
 
Protein sequence
MQGTQQSLPL AVVRGQAMTE MPQDLFIPPE ALEVFLESFE GPLDLLLYLI RKQKLDVVDL 
PISQITAQYL EYIAMLTQAR IELASDYLVM AATLAEIKSR LLLPRMVAED EVEEDPRAQL
IRQLKAYEVI KEASQKIDDL PRLERDVFQA TAAPSPNIKP LVIPPDVSLF EIARAFGDVL
KRIDAYEDHH VKREQLSTRE RMSQILAMLN SEDFTPFERL FSVEEGRAGV VVTFLALMEL
VKELLVELYQ TEPFSTIYVK AY