Gene SO_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3004 
Symbol 
ID1170692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3120229 
End bp3121194 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID637344814 
Productprophage LambdaSo, DNA modification methyltransferase, putative 
Protein accessionNP_718572 
Protein GI24374529 
COG category 
COG ID 
TIGRFAM ID[TIGR01712] phage N-6-adenine-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCA ACAGCCAATA TGCCAGCGCC CTGCGCGAAC TCAAAACCAA ACAATCCCAC 
TTGCTAAAAG AAGTCGGCGA CCAATGGCGC ACGCCAGACG CGCTTTACTG GGGCATATTC
GCGAAGTTTG GGCCCTTTAT CCTCGACCTA TTCAGCGATG GCGATAACGC CAAATGCCCA
CGCTATTACA CGGTTGAAGA TAACGCCCTA ATCCAAGACT GGACCAAGGA CTTAGCAGGC
GGCAAAGCGT TTGCAAATCC TCCATATTCC CGCAGTAGTT ACGAAGATAA TCAAGCCATT
ACAGGTATGC GCAACATTAT CGCCAAGTCC ATAGATGAAC GCGACAAAGG CGCTAAGTTT
GTTTACTTGA TTAAGTCTGC GACCTCAGAA GTCTGGTGGC CAGAAGATGC GGATCACGTT
TGCTTCATCC GTGGACGTAT CAGCTTTGAC TTACCTGATT GGTTTGTGCC TGCAGACAAA
AAGCAAGAAG CATCAAGCGC TGGGTTTGCC TGTGCGATTG CGGTATTCGA TAAGACATGG
CGCGGCGAGC GCATGAGCTA TGTTAACCGC GACGATTTAC TGCGCGACGG TCAAGTGATG
CTCAATATGG TTGCTGCAGC GGCTAATAAA AAATCCGCAA CCTACATCAC TGAGACCATT
GAAACGCGCC CAGATATTGC CGAACCAGTC GAGCCAATCA TTGAGCACCA AGTAAATGAT
CAGCTCGATA TCGAAGATCA AATCGCACGG GACAGCACGG TTGCAAACAG CGTATGGCCT
AAAGAGGTTT TGGAGTTAGT CGAGCAAGCA TTCAACGACA ACCCAAACAC TAAAACCGAT
GTTCGCCAGC AAATGCTGTG CGAGCGAGTA AACCAACGCT TACTCGATAA CGTCCTTAAA
AAAGACATTA TCGCAGAGGT AAACAATATG CTCGATCGCT GCGAACGAGT GGAGGATGCA
GCATGA
 
Protein sequence
MSVNSQYASA LRELKTKQSH LLKEVGDQWR TPDALYWGIF AKFGPFILDL FSDGDNAKCP 
RYYTVEDNAL IQDWTKDLAG GKAFANPPYS RSSYEDNQAI TGMRNIIAKS IDERDKGAKF
VYLIKSATSE VWWPEDADHV CFIRGRISFD LPDWFVPADK KQEASSAGFA CAIAVFDKTW
RGERMSYVNR DDLLRDGQVM LNMVAAAANK KSATYITETI ETRPDIAEPV EPIIEHQVND
QLDIEDQIAR DSTVANSVWP KEVLELVEQA FNDNPNTKTD VRQQMLCERV NQRLLDNVLK
KDIIAEVNNM LDRCERVEDA A