Gene SO_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3002 
Symbol 
ID1170690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3119217 
End bp3119888 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content46% 
IMG OID637344812 
Producthypothetical protein 
Protein accessionNP_718570 
Protein GI24374527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGC GCCCCATTAT CTTCAACACC GAAATGGTGC GCGCCATTCT TGATGGCCGT 
AAAACCCAAA CGCGCAGACC AATCAATCCA CAACCAGAGC CTGACACTGA AACATCCAAG 
GGCGGTTATT GGTTTCCTTG CCATGCATTT CAATCGATGG TGCATGTAGA GGATCTTCAA 
GATCCATTAT GGCTGGGTAT GGCGAGTGAT GCCTGCCAAA TTTGCTCAGT CGGCGATCAG 
CTTTGGGTGC GCGAGACATT TCAATATGGT TTATGCACAA AATCTGGTTT TGCTTATAAA 
GCAACCCATA ACCCTTCTGA TTTAGAAGAG GGCTGGAATG AAGTTATCAA ATGGAAACCA 
TCTATCCACA TGCCGCGCTC TGCTGCTCGC ATCATCCTTG AAGTAACCGA TATTCGTGTA 
GAGCGATTAA ACGATATCAG CGAACAAGAT GCTAAAGCCG AAGGTTTGCA ATATAGCTCC 
ATTTACCAGC AATGGGGCGG AGTTGAAAAG CATTTAAGCC ATAAGCCACA TTCGCCTCAT 
TGGCGTTGGT ATAAAAATCC ACAACATGCG TTTAAATCCC TGTGGAACTC AATCTATAAA 
AATTGGGATG CCAACCATTG GGTTTGGGTG ATTGAGTTCA AAGTGATCAG CACCAAAGGC 
GGTGCAGCAT GA
 
Protein sequence
MKQRPIIFNT EMVRAILDGR KTQTRRPINP QPEPDTETSK GGYWFPCHAF QSMVHVEDLQ 
DPLWLGMASD ACQICSVGDQ LWVRETFQYG LCTKSGFAYK ATHNPSDLEE GWNEVIKWKP 
SIHMPRSAAR IILEVTDIRV ERLNDISEQD AKAEGLQYSS IYQQWGGVEK HLSHKPHSPH 
WRWYKNPQHA FKSLWNSIYK NWDANHWVWV IEFKVISTKG GAA