| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2965 |
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| Symbol | |
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| ID | 1170653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3098819 |
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| End bp | 3100117 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344776 |
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| Product | prophage LambdaSo, HK97 family portal protein |
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| Protein accession | NP_718534 |
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| Protein GI | 24374491 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAA AAAACTCACT TGCTTTGGTT ATTGCTAAAG CAGCAAGTCA GCCGTTTGCG
TCACTCGACA GCTTTATGGG TAAAACCTTA AGGCTAACAG ACGGTGATTT TTGGTCGCAA
TTGATGGCAA CGTCTAAAAG CGGAAAAACA GTCAATGTGA ATACTGCTAT GCAGCTTGCT
GCAGTATGGG CCTGTGTACG CCGCATTTCA GAAACTGTTG CAATGCTGCC GCTAGGCTTG
TACGAGCGCC AAAGTGATGG TGGCCGGATC CAAGTTCAAA ACAGTCTTTC TACTGTATTA
AGCATTAAGC CCAATGCAGA TATGACTGCC ATGCAGTTTT GGGAGGCAGT ACTCGCATCA
TTGCTACTTA AAGGAAATGC GTTTATTGAA ATCCACCGCT CTGGCGGCGA GATTATCGCC
CTCGATTTTC TTATGCCGCA CCGCATGGAT ATCGACTTGG ATGATAGCGG TAGCTTGATC
TACTGGTACA CGCCAAGAAA CGGATCGCGC CGTCAAATCA AAAAGCAAAA CATGATGCAC
ATTCCTGCAT TCTCGTTAGA TGGGTTGATT GGTTTATCCA CCATCTCTTA CGGTGCCAAT
GTGTTTGGTG GTGCCATGTC TGCCGAGGAT GTGAGCGCAA GTACCTTTAA AAACGGCATG
ACAAAAACGG TCGCTTTTAA AGTTGATCGC GTAATGAATA AAGAGCAACG CGCAGAATTT
CGTGAGTATG TAAAAACGAT TACTGGCGCA ATGAATGCTG GAAAATCACC CGTACTTGAA
CAAGGCATCA CCCCTGAGTT AATCGGCATT AACCCAATTG ATGCCCAGTT ACTCGAGTCA
CGAAACTACA GCGTAGAAGA GATTTGCCGC TGGTTTTTGG TGGACCCGTC ACTCATAGGA
TTTGGCGGTA AAGACAGCAA TTGGGGCACT GGACTCGAGC AAAAGATGAT CGGCTTTGTC
ACCTTAACCT TATCGTCTTG GATCCGCCGT ATCGAGCAAT CAATCTCTAT TAATCTGCTC
ACGCCAGCAC AACGGCAAAC CCAATACGCA CAATATAACC TTGAGGCATT ACTGCGGGGC
GATAGCGCCT CACGCGCCGA GTTCTACAGC AAAATGACTC AAAACGGCAT CTACACCCGT
GATGATTGCC GGGTTAAAGA AAACTTACCG CGCCGCGGTG GTAATGCCGA TGTCTTAACC
GTTCAAACCA ACTTAGCCCC CATTGATCAG CTGGGTGCTC AATCAGAATC TGCAAAAGTC
CAAGCCGCAC TAAACAACTG GCTCAATCAA GATAACTAG
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| Protein sequence | MKQKNSLALV IAKAASQPFA SLDSFMGKTL RLTDGDFWSQ LMATSKSGKT VNVNTAMQLA
AVWACVRRIS ETVAMLPLGL YERQSDGGRI QVQNSLSTVL SIKPNADMTA MQFWEAVLAS
LLLKGNAFIE IHRSGGEIIA LDFLMPHRMD IDLDDSGSLI YWYTPRNGSR RQIKKQNMMH
IPAFSLDGLI GLSTISYGAN VFGGAMSAED VSASTFKNGM TKTVAFKVDR VMNKEQRAEF
REYVKTITGA MNAGKSPVLE QGITPELIGI NPIDAQLLES RNYSVEEICR WFLVDPSLIG
FGGKDSNWGT GLEQKMIGFV TLTLSSWIRR IEQSISINLL TPAQRQTQYA QYNLEALLRG
DSASRAEFYS KMTQNGIYTR DDCRVKENLP RRGGNADVLT VQTNLAPIDQ LGAQSESAKV
QAALNNWLNQ DN
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