| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2963 |
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| Symbol | |
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| ID | 1170651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3096752 |
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| End bp | 3097942 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344774 |
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| Product | prophage LambdaSo, HK97 family major capsid protein |
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| Protein accession | NP_718532 |
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| Protein GI | 24374489 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACC CAAATTTTGA AAAGCAAATT GAAGAATTAG GCGTCAATCT AACCAAGATT
GGTGATCAAA TTAAATCAGC AGCTGAAGAA ACCAATAAGC AGATCAAGGC TTCTGGTGAA
ATGCATGCCG AAACTCGCGA TAAAGTCGAT AAGCTGCTGT CAGAACAAGG AGCATTGCAA
GCTCGTTTGC AAGAAGCTGA GCAAAAGCTG CTTAAAGGCG CCCAAAGCAA CCAGCAAGAG
CGCGAGCAGT CAATCGGTGA GCGTGTGGTT AACGACAAAG AAATGGAAGG TGTTAGCAGT
TCATTCCGTG GTAGCCGTCG AGTTGGTATG CCACGTTCGG CAATCACCTC AGCCACAGGT
TCAGGTGCTG GTTTAGTTCG TCCTGATCGC ATGGCTGGCA TTGTTGCTGG TCCAGAGCGT
CGTTTAACTA TTCGAGACCT AATTGCTCCA GGTGAAACTG AGAGCAACAC CATCGAATAC
GTTAAAGAGA CAGGCTTTAC CAATAACGCG GCACCAGTAG CTGAAGGTGC AGCTAAACCT
TACTCTGAAA TCACATTTGG CCTAGTTAGT GCTGGTGTGC GCACCATTGC ACATTTATTT
AAAGCTAGTC GCCAAATTTT GGATGACTCA AAACAACTGC AAAGCTTTAT CAATGCCCGT
GCACGTTACG GCTTAATGCT TAAAGAAGAA GTTCAGCTGT TATACGGCAA CAACACTGGC
GCCAATCTGC ACGGAATTAT GTTGCAGGCA AGTGCTTACG TTAAGCCAAC AGGTGCAACG
GTTGATACCG AGCAGCATAT TGACCGTATT CGCTTAGCGT TACTGCAAGC GGCGTTAGCA
GAATATGCCG CTGATGGCAT TGTGCTCAAT CCAATTGATT GGGCCGTAAT TGAAACGCTG
AAGGATAGCA ACAAAAACTA CCTGATCGGC AAACCACAAG GACAAACCGT CCCCACACTG
TGGAACCGCC CAGTAGTTGA AACCCAATCT ATCGTGCAAA ACGAGTTCTT AGTCGGCGCA
TTCCAAATGG GCGCACAGAT CTATGACCGC ATGGATATCG AAGTTTTAAT CTCTACCGAG
AACGATAAAG ACTTTGAAAA CAACATGGTC AGTATCCGTG CAGAAGAGCG CTTAGCGCTG
GCCGTTTATC GACCAGAGGC ATTTGTTAAG GGTAACTTTA CTTTTGCCTA A
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| Protein sequence | MPNPNFEKQI EELGVNLTKI GDQIKSAAEE TNKQIKASGE MHAETRDKVD KLLSEQGALQ
ARLQEAEQKL LKGAQSNQQE REQSIGERVV NDKEMEGVSS SFRGSRRVGM PRSAITSATG
SGAGLVRPDR MAGIVAGPER RLTIRDLIAP GETESNTIEY VKETGFTNNA APVAEGAAKP
YSEITFGLVS AGVRTIAHLF KASRQILDDS KQLQSFINAR ARYGLMLKEE VQLLYGNNTG
ANLHGIMLQA SAYVKPTGAT VDTEQHIDRI RLALLQAALA EYAADGIVLN PIDWAVIETL
KDSNKNYLIG KPQGQTVPTL WNRPVVETQS IVQNEFLVGA FQMGAQIYDR MDIEVLISTE
NDKDFENNMV SIRAEERLAL AVYRPEAFVK GNFTFA
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