| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2960 |
|---|
| Symbol | |
|---|
| ID | 1170648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3095699 |
|---|
| End bp | 3096061 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637344771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_718529 |
|---|
| Protein GI | 24374486 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5614] Bacteriophage head-tail adaptor |
|---|
| TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCCT ATCGTTTACG TCATCGAATC CACCTGCAAC AGCCAGTAAA GCAGCAAGAT
CCGCTCACAG GCGAAACATC AACATCTTGG CAAACCTTCA CCTTAGGCAA TAAGCCGCTT
GATAAGGTTG CCGCAGAGGT ATTAACAGGG GCTGGCCGTG AATTTTATGC AGCGGATGCA
AAACAAGCTG AAACCAGCGC CAGAATCAAC CTTAGATGGT TCCCAATTGA TCTCAGCTTG
TTTTACCAAT GCCGAATTTT ATGGGACGGC AGAACCTACG ATATTCACTC GATAGAAACA
GATTTAACAG GCCGTCAAGA GTGGCGCTTA CGCTGCAAAG ATGGTGTGAA TCATGGAATT
TAA
|
|---|
| Protein sequence | MLSYRLRHRI HLQQPVKQQD PLTGETSTSW QTFTLGNKPL DKVAAEVLTG AGREFYAADA
KQAETSARIN LRWFPIDLSL FYQCRILWDG RTYDIHSIET DLTGRQEWRL RCKDGVNHGI
|
|---|
| |