Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2930 |
Symbol | |
ID | 1170618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3062434 |
End bp | 3065157 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344742 |
Product | hypothetical protein |
Protein accession | NP_718500 |
Protein GI | 24374457 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAACA AGACGATAAA TCCACTCACG TGCAAGGGAT TGATGGCTAA ACAGGGCCAT CCCCCACAAC AAAATCACAA GACTCATCGT AGAGCACATT GGCTGATGCC AACGGGAGTA GCCCTATTGA TGGCTTTCAA TCTAACCGGT TGTTTTTCAG ATGATGATCC CGCACCGGTT GTCACGCCAC CCGTAGTACA ACCACCAGAA CCTGGCCCCT CCTTCCCCGA AGGCGCCATA AAAATCCCAG CGGGTGATAA CCTCACGACT CGCATTCAAG AAGCCTTAAT TAATGCGCAA AGTGGCGCCG TGATAGTGCT TCCTAAAGGG ACCTTTAATA TTGACTCGAC CTTGCTGTTT GATGGTGACG TGGATGGGGA TGGCAGCTAT GCCAAAAACG TTACTATCAT GGGTTATGGG ATGAAGGACA CTGTGCTTAA TTTCTCTCAA GCCAACTCGG GAGATGGGAT TTTCGTTCAA AACGCACTCA ACATTACCAT TCAAGATCTG TCGGTCAATG AAGCGAAAAA CAACGGTATC AAGCTTAAAA ATACTAACGG CATTATCCTG CGCCGTGTTG GCGCGGTATG GGAAGGCGAA CTCGATAAAG ATAATGGCGC CTACGGTCTG TACCCCGTTG AATGTGAAAA CATTCTGATT GAAGACAGTT ATGTTCGCGG CAGTGCCGAT GCGGGGATTT ATGTCGGCCA ATCCCAGTAT ATTGTCGTAC GTCGCAATAT CGCCAAAGAA AACGTGGCAG GGATTGAAAT CGAAAACTCT AAATATGCCG ACGTTTATAA CAACGAAGCG ATGGGCAATA CCGGTGGGAT TTTAGTCTTC GACTTACCCA TCAACAACCA TAGATACGGC TCTAGTGTGC GGATTTTCAA CAACAAAGTG TATGATAACA ACACACCCAA CTTCGCCAAT GCTTCGGCTA ACCCCGCGGG CGTGCATATC GTGCCGCCGG GCACTGGAGT TATTATTTTA TCCACCGCAG ATGTGGAAAT CTTCAATAAC GAAATTACCC GCCACGACAC CCTAGGTGTA ACAATCAGCA GCTTCTTTAT TGCAGAACCT GATATGACCT CCTTTGTGGG CAACTACGGT CAACCAGGCC AAGCGATTGA CGATGGTTGG AGACCTGTAC CGCGTAATAT TTATTTACAC GACAACAAAA TTACCGACTA TGGCACTAAG CCAAAAGGTT ATTTAATTCA AGATATTATT CGCGCCTATG TGATAAGCCA CGGTACCTTG CCCGGCGTGC TCTATGACGG TCTAGGCGAA ATGCTCGCCA ATAATGGCAC CGCTGCCTAT CTTGGCTTAA AAGAACCCCC CTTTGCCACT GACGGTAGCG ATAACGTTTG TGCTAGCGAT AACGGGGATG TGTCCTACGG TAGACTCTAT GCCAACAGCA ACACGGATAT CAGCATCGCC GATGTGCAAT ATGAAAAGAC CCAAAATGCC CTACTGAAAT GTACTCAAGT CAGTCTACCA GTGCATACCG TCACCTTTGC AGGCCAAGTA TTTGGCTGTG GAGTTGACGA TAATACTGCA GGTTGTGATG GCGGCGTATT GGTCGGTGGC GGAGGCACAA TCGGTGAAGG CGAAGGCGGT CTAGTGGGCG ATGGTGACCA AAGTCTGTGC AAAGCCACTG GCTCAAATGT CAGCTGGGAT GCACTATTGA AAGCAAACTG CCCGAAACTG TCGGATTACA ATCTGTTTAG CGATGCTAAA AATCCAACCG CTGCCGCTAA TTCAGGTGGT GTCCCTTATG ATCTCAACAC GCCGTTATTT ACCGACTACG CCAGTAAATA TCGCTTTGTG TATTTGCCTT CTGGACAAAA AGCCAGTTAC TCAGAAAATG AGACTTTCGA CTTCCCTGTG GGAAGCGTCA TTGTAAAAAC CTTTGCCCTA CCCAGTGACA CCAGTAAGCG CGGTATTAGC AACGAGAGTT TGATAGAAAC GCGTCTGCTG ATCCATCGTC CAACGGGATG GAGTGCCCTG CCCTATGTGT GGAATGCCGA TAGAACCGAT GCTACCTTGG CAAAAGCTGG AGCCATTAGC AGCCAAACGC TGACACATAA AGGTCAAAAT CTCACCTTCA ACTACGTGGT TCCCAACATG AACCAATGTA AACAGTGTCA CCAGTTTAAA GCCGATGACA AAAGCAATGC CGTGTTCGTG CCAATTGGTC CCAAAGCACG CCACTTGAAC CGCAATTACA GCTACCAAGA TGGCACGATG AACCAACTGT TAAAATGGGA AAATCTTGGT ATTTTGCAAG GATTACCAAA CCTTAGCCAA GTGTCACAAG TACCGGCGTA CCAAGATGGG GATGAAACGA CAGTCGCGAG TTTAAGTGAC TCAGCCTTAA TGCAAACAGC AAAGGGTTAC TTAGATATCA ACTGTGCCCA CTGCCATAGA CCCGAGGGCA ATGCCTCTAA TACTGGCTTA AAACTCGAAT ACTGGCGTGG TTATAGCGAT GATGCGGGTT TCTCCCACGG CACCTGTAAA TCACCCGTTG CCTACGGTGG TGGAAACCTC GGTTTTGATG TGGTCCCCGG CAATGCCGCA AAGTCCATCA TGCACTTTAG AATGCAAAGC ACGTCCCCAG GCGATCGTAT GCCTGAGATT GGCCGTAGCT TAGCCCATGA TGAAGGTGTA GCACTGATCA GCGAATGGAT TAAACGTCTA CCCGCGGCAA ACTGCTCACA ATAG
|
Protein sequence | MFNKTINPLT CKGLMAKQGH PPQQNHKTHR RAHWLMPTGV ALLMAFNLTG CFSDDDPAPV VTPPVVQPPE PGPSFPEGAI KIPAGDNLTT RIQEALINAQ SGAVIVLPKG TFNIDSTLLF DGDVDGDGSY AKNVTIMGYG MKDTVLNFSQ ANSGDGIFVQ NALNITIQDL SVNEAKNNGI KLKNTNGIIL RRVGAVWEGE LDKDNGAYGL YPVECENILI EDSYVRGSAD AGIYVGQSQY IVVRRNIAKE NVAGIEIENS KYADVYNNEA MGNTGGILVF DLPINNHRYG SSVRIFNNKV YDNNTPNFAN ASANPAGVHI VPPGTGVIIL STADVEIFNN EITRHDTLGV TISSFFIAEP DMTSFVGNYG QPGQAIDDGW RPVPRNIYLH DNKITDYGTK PKGYLIQDII RAYVISHGTL PGVLYDGLGE MLANNGTAAY LGLKEPPFAT DGSDNVCASD NGDVSYGRLY ANSNTDISIA DVQYEKTQNA LLKCTQVSLP VHTVTFAGQV FGCGVDDNTA GCDGGVLVGG GGTIGEGEGG LVGDGDQSLC KATGSNVSWD ALLKANCPKL SDYNLFSDAK NPTAAANSGG VPYDLNTPLF TDYASKYRFV YLPSGQKASY SENETFDFPV GSVIVKTFAL PSDTSKRGIS NESLIETRLL IHRPTGWSAL PYVWNADRTD ATLAKAGAIS SQTLTHKGQN LTFNYVVPNM NQCKQCHQFK ADDKSNAVFV PIGPKARHLN RNYSYQDGTM NQLLKWENLG ILQGLPNLSQ VSQVPAYQDG DETTVASLSD SALMQTAKGY LDINCAHCHR PEGNASNTGL KLEYWRGYSD DAGFSHGTCK SPVAYGGGNL GFDVVPGNAA KSIMHFRMQS TSPGDRMPEI GRSLAHDEGV ALISEWIKRL PAANCSQ
|
| |