Gene SO_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2928 
Symbol 
ID1170616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3060282 
End bp3060965 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID637344740 
Productacyl-CoA thioesterase I, putative 
Protein accessionNP_718498 
Protein GI24374455 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTAT TTTTTGAAAC GACGTTAGAC ATAGGATCCT TCTTATACAA ATCGTTTTTG 
CGTCAATCGC ATAGATGCAA GCCAATGGCG AAAGCCTTGG TGATCTGCAT CCTGTTAAGT 
CTGTGTGTTA CCACGCCAGT TCAGGCGGCG AAAGTGTTGA TCCTCGGCGA TAGCTTAGGT 
GCAAGCTACG GCATGTCGGA ACAACTAGGC TGGGTGGCGC TGCTGCAAAA AAACTTACCC 
GAGCATGACT TTACCAATGG TTCGGTGAGC GGTGAAACCA CAGCGGGCGG TTTGCGTCGC 
TTGCCTGCCC TGCTTGATTC CGTTGCACCC GATTTAGTGG TAGTCGAACT CGGCGGTAAC 
GATGGTTTAC GTGGATTCCC CCCGACGCAA CTTAAAAATA ACCTAACCCA AATCATTACC 
CTAGCCAAAA ATAGCGGTGC CAAAGTGCTA CTGACCGAAA TCATGGTACC GCCTAACTAT 
GGCCCTCGCT ACACCCAAAA GTTCACCGAA GTGTATCAAG AGATTGCCAA GGATGAGGAT 
ATCCCGCTGA TCCCCTTCTT TATGCAGGAG ATCGCTCCCT ACCCTGAACT GATGCAAAGA 
GATGGCATTC ATCCCAATGA AAAGGCCCAA GATAAAATTG CCAATTGGAT GCAACCTTGG 
ATTGAAAAAG CGTTAACGCA ATAA
 
Protein sequence
MALFFETTLD IGSFLYKSFL RQSHRCKPMA KALVICILLS LCVTTPVQAA KVLILGDSLG 
ASYGMSEQLG WVALLQKNLP EHDFTNGSVS GETTAGGLRR LPALLDSVAP DLVVVELGGN 
DGLRGFPPTQ LKNNLTQIIT LAKNSGAKVL LTEIMVPPNY GPRYTQKFTE VYQEIAKDED 
IPLIPFFMQE IAPYPELMQR DGIHPNEKAQ DKIANWMQPW IEKALTQ