Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2927 |
Symbol | |
ID | 1170615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3059552 |
End bp | 3060313 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637344739 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_718497 |
Protein GI | 24374454 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAACG TCGTTTCAAA AAATAGTGCC ATCAATGTTG TTAACCTCGA AAAATCGGTG ACTACTCAGG AAGGTTCGCT CACTATCCTC AAGGGCATTA ACTTAGATGT CAAGCAGGGG GAAAGTGTGG CGATATTAGG GCCATCCGGC TCGGGTAAAT CGACGTTACT TGGCTTACTC GCCGCGCTCG ACACCCCAAC AGCGGGGGAG ATTTGGCTCG ATGGCGAGGC CCTATCACCG CTCAATGAAG AACAAAAAGC GGCGCTGCGT AAGCAGAAAG TGAGCTTTAT TTTTCAATCC TTTATGTTGG TCGACACTTT AACAGCCCTT GAGAATGTGA TGCTGCCAGC CGAACTTGCT GGGGTTAAAA ATGCTAAGGA AAAGGCCGAG GCTATGCTTG GGCGGGTTGG TTTATCCCAC CGTTTGACCC ATTTACCCAA GCAGTTGTCC GGTGGCGAGC AGCAAAGGGT CGCGATTGCT CGCGCTTTTA TCTGTGAACC CAAAGTGCTG TTTGCCGATG AACCCACGGG CAATTTGGAC AGTGTTAATG GCCATAAAAT TGCCGATATG TTGTTTGAAC TTAACCAAGA GAACCACACA ACGCTTATCC TCGTGACCCA TGATTTACAA CTGGCGAAAC GCTGCCAACG GCAACTCGTT ATGGATAACG GCCACTTACA GGAGAACGAG CACCCGAATG CGTTGCAATC CAACAGTGCC TGTGAAAGTA ACAGCATAAC TGCCAGCGCC AAGGAGGCTT AA
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Protein sequence | MSNVVSKNSA INVVNLEKSV TTQEGSLTIL KGINLDVKQG ESVAILGPSG SGKSTLLGLL AALDTPTAGE IWLDGEALSP LNEEQKAALR KQKVSFIFQS FMLVDTLTAL ENVMLPAELA GVKNAKEKAE AMLGRVGLSH RLTHLPKQLS GGEQQRVAIA RAFICEPKVL FADEPTGNLD SVNGHKIADM LFELNQENHT TLILVTHDLQ LAKRCQRQLV MDNGHLQENE HPNALQSNSA CESNSITASA KEA
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