| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2926 |
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| Symbol | |
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| ID | 1170614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3057041 |
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| End bp | 3059548 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344738 |
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| Product | ABC transporter, permease, putative |
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| Protein accession | NP_718496 |
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| Protein GI | 24374453 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTA ATTTGGCATG GCGCCTGTTT AAGCGAGAGC TGCAACAGGG GCAATTGTTA
TTAATTATCC TCGCTATTAC CTTGGCGGTG CTCTCGGTGA GTGGCCTTGC GCGGGTGAGT
GAGCGATTGC AAGTCGCTAT CAATGGGCAG GCGACGCAAT TTATTGCTGC GGATCGTATT
ATCGACTCAC CCGTGCAAAT TGATAGCACT ATTCTGGCCA AGGCCGATGA GCTTGGCCTT
AAGCATGTCA CCAATATGCA ATTTAACTCC ATGGTGTATG CGGGCGATCA ATTTCAGTTA
GTCACAGTGC GTGCGGTTGA GTCTGGTTAT CCACTTAAGG GAGACATCGA ACTTAAAGCG
GACAATGGCC AAGATGTAAA AGCCCAAGGC TTGCCCCAGG CCGATGAAAT TTGGTTTGAA
AGCCGCTTAG GTGGGCTCTT GGGATCCCCC AAAACGCTCG AGCTAGGCAA CAGCGAGTTT
AGCTTAAGCC AAGAAATCAG CCGCTTACCC GATGCGGGAT TTAATCCCTT TGCGTCTTCA
CCCGTGGTAT TAATGCGGAT AGAAGATGTT GCCAAGACTG GGGTTATCCA GCCTGGTAGC
CGAGTGACTT ATCTGTATCA ATTTGCCGGT GATGAAACTG CGCTAACTGC CTTTGAAAAC
AGTGTTAAAC CGCTGTTGAA TAATACCCAG CGTTGGGTCG ATGTACAGTC AGGCGACTCG
CCGATTGCTG GTGCGGTAAA GCGGGCGGAG CGATTTTTAC TGCTTGCCAG CTTGCTCGGT
ATTGCCCTTG CTTGCGCTGC CATAGGGATT GCCGCCCAGC GTTATTGTCA GCGTCATTAT
GATGTGGTGG CGATGCTAAA AACCTTTGGC GCTTCATCGT CACAAATTCG GCGTTTATTC
GGGATACATT TATTGCTGGT GACCTTGTTT GGTATTGGAC TTGGCTTGAT AGGGGGCGCA
CTGCTCGATT TAGGCATTAA TCAGTTGTTA CCCCCTGAAA TCGCGGCTTA TTCGCCACCA
TTGACGCGTC CGATACTCCT TGGCATCAGC ACTGGGCTTA TCAGTGCCTT TATGTTTTCC
GCTTATCCTT TGATGCGACT GCTCGCCATT CCACCGCTGC GGGTATTGCA ACGACAACTC
GAAGGGTTAC AACTGGGCAT GTGGCTGCAT TTACTCTTAA GCTTGGGGGC GATGGCGCTC
TTGGGATACC TGTATTCCCA AAGTTGGACG CTGACCTTAA CCGTTGTGGC GGCGGTATTG
TTACTTGGCG TGCTGCTGAG CCTTTTGGGC TTTGTGATGA TCCGCCTCGG CCACAGTGTT
GGCATGAAAA CCACCAATCC CTTGCAACTT GCGCTGGCGG GCTTACGGCG CCGAGCTAGG
CAAAATGCGG TGCAATTGGT GGGTTTTAGT GCGGCGCTGG TATTGCTACT GACAATTTTG
GCCCTTAGGC AGGATTTACT GAATGAGTGG CAAAAGCAGC TGCCCGAGAA TGCCCCTAAC
TACTTTTTAG TGAATATTGC TCCCGACGAT GCTAAGCCAT TAAACGACTT TATGGCGCAA
AAGGGCATAG CCGCAACAGA TATCTACCCC GTTATTCGCG GCCGGCTTAC GCAAATTAAT
GGCGAAACCT TGATCTCCAA CGAGCAGGCG GAGGCGGGGG AAAAAGGCCG AGTGGGGATT
TCTCGCGAGC TCAATCTCAC CTGGCGTAAT GCCTTGCCAG CCAATAACGA GTTACTCGAA
GGGCAATTTA ATCAAGCTGC CGATGAGGTG TCGGTGGAAT CGGGTGTCGC CGAGCGTTTA
GGAGTTAAAT TGGGTGATAA ACTGACCTAT GTGATTGATA ACCAAGAGCT CACGGTTAAG
GTCGCCAGTA TTCGCGCCGT ACACTGGGAA ACATTACAAC CAAACTTTTT TATGATTTTT
ACTCAAGAAG CGTTAGCACC GTTTGCCTAT ACCTCCATGG CAAGTTTCTA TTTGGATGAA
AAAGGACCTA ACAATACGGC GAGCGGCGAG GGTGCACCGA AAAATACGGT GATCCTCGAG
TTGATCCAGC AATTTCCAAC GGTATCGATT ATCGATGTGG GCGCCATGGT GGGACAACTT
CGGCAAATTA TCGAGCAGGT TTCCCTGTCC TTGACCTTAG TCTTAGTGCT TGTATTGCTG
GCAAGTGCAT TGGTGCTTAT CGCTCAAACT GAAGCGGGGA TGGCAACGCG CCAGCGCGAG
CTCGCAGTGC TGCGTACCTT TGGTGCTTCT GGTTGGTTAT TACGCAGTGC AACTGGGTTT
GAGTTTGCTT TGCTTGGCGG GATTGCAGGG GTATTGGCGG TGATCGTTGC CGAATTTGCC
TTGTATCTGT TAAAGACCCA AGTATTTGAA CTCAATGTGT ATATGCACTG GCCTTGGTGG
GCCATTGCAC CTGTGTCGGG CGCACTGTTA GTCGCATTAC TTGGGGTATG GCGCTGCCGC
CAATTACTCA ATCAATCCTG TGCTGAATTG TTAAAGGCAG GGAGTTAG
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| Protein sequence | MELNLAWRLF KRELQQGQLL LIILAITLAV LSVSGLARVS ERLQVAINGQ ATQFIAADRI
IDSPVQIDST ILAKADELGL KHVTNMQFNS MVYAGDQFQL VTVRAVESGY PLKGDIELKA
DNGQDVKAQG LPQADEIWFE SRLGGLLGSP KTLELGNSEF SLSQEISRLP DAGFNPFASS
PVVLMRIEDV AKTGVIQPGS RVTYLYQFAG DETALTAFEN SVKPLLNNTQ RWVDVQSGDS
PIAGAVKRAE RFLLLASLLG IALACAAIGI AAQRYCQRHY DVVAMLKTFG ASSSQIRRLF
GIHLLLVTLF GIGLGLIGGA LLDLGINQLL PPEIAAYSPP LTRPILLGIS TGLISAFMFS
AYPLMRLLAI PPLRVLQRQL EGLQLGMWLH LLLSLGAMAL LGYLYSQSWT LTLTVVAAVL
LLGVLLSLLG FVMIRLGHSV GMKTTNPLQL ALAGLRRRAR QNAVQLVGFS AALVLLLTIL
ALRQDLLNEW QKQLPENAPN YFLVNIAPDD AKPLNDFMAQ KGIAATDIYP VIRGRLTQIN
GETLISNEQA EAGEKGRVGI SRELNLTWRN ALPANNELLE GQFNQAADEV SVESGVAERL
GVKLGDKLTY VIDNQELTVK VASIRAVHWE TLQPNFFMIF TQEALAPFAY TSMASFYLDE
KGPNNTASGE GAPKNTVILE LIQQFPTVSI IDVGAMVGQL RQIIEQVSLS LTLVLVLVLL
ASALVLIAQT EAGMATRQRE LAVLRTFGAS GWLLRSATGF EFALLGGIAG VLAVIVAEFA
LYLLKTQVFE LNVYMHWPWW AIAPVSGALL VALLGVWRCR QLLNQSCAEL LKAGS
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