Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2920 |
Symbol | |
ID | 1170609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3051737 |
End bp | 3052843 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344733 |
Product | hypothetical protein |
Protein accession | NP_718490 |
Protein GI | 24374447 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACGAT CCAATACGCC GACTGCCGCC TACAAAGGTT TTGCAGTCAT GGCATTTGTG GTGATTATTT TGGCAGGGAT AAAGGCCGCA AGCCCGATTG TTGTTCCCTT TGTCTTATCC TGTTTTATTG CGGTGATCTG TAATCCGGCC ATTGGCTTGA TGACTAAATA TCGTGTGCCT AAATGGCTCG CGGTGATTCT ATTGATGTGT TTTATCGTGT TGATGGGATT GTGGCTCGCC TCCTTGGTGG GCAGCTCAAT CAATGAGTTT TCTAAGCAGT TGCCTCAATA CCGAAATCAG CTGGTGGAGC AGTTTTCTTG GGTGTTGCAT AAATTACAGG CGCTGAATAT TCAAATCTCT AAGGAGCAAG TGCTAGCCTA TTTTGACCCC GGCATGGCGC TGTCGATGAC CACCAATATG CTGTCCGGTG TAGGCAATGT GATGGCGAAT TTATTCCTGA TCATTTTGAC CATCGTCTTT ATGTTATTTG AGGCATCATC TTTACCGAAA AAGTTGCACT TGGCATTGGA TGATCCCGAT ATGCGTTTGC AACAAATTGA CCGTTTCCTG CAATCGGTGA ATCAATATAT GGTGATCAAA ACCCTAGTCA GTTTAGCGAC GGGTTTAATT GTTGGTGTTG GACTGGCCTT TATCGGCGTG GATTATGCGT TACTTTGGGC GGTAATTGCT TTTTTATTCA ACTACATTCC TAATATCGGG TCGATTATTG CCGCCATCCC CGCCGTATTG TTAGCCTTTA TTCAGTTAGG CCCTGCGGCC GCTGGTGGGA CGACGATGCT ATACATAGGC GCTAACATGG TAATGGGTAA TGTGGTTGAG CCTAAATTTA TGGGCCGAGG ATTAGGCCTT TCTACCTTAG TGGTATTTTT ATCATTAATT TTTTGGGGGT GGTTACTGGG TTCCGTCGGT ATGTTGCTGT CAGTTCCCTT AACTATGGTG GTCAAAATTG CCCTCGAATC GAGTAAAAGT GGTAGTTGGT TAGCGATATT ATTATCCGAT GATGTGGATG ATAAACTGGT CGTTCAATCT TCAAGCGCAC ATGACTCGAC GAATAGGGTC GATACACATT CAACTGATAA TAAGTAG
|
Protein sequence | MTRSNTPTAA YKGFAVMAFV VIILAGIKAA SPIVVPFVLS CFIAVICNPA IGLMTKYRVP KWLAVILLMC FIVLMGLWLA SLVGSSINEF SKQLPQYRNQ LVEQFSWVLH KLQALNIQIS KEQVLAYFDP GMALSMTTNM LSGVGNVMAN LFLIILTIVF MLFEASSLPK KLHLALDDPD MRLQQIDRFL QSVNQYMVIK TLVSLATGLI VGVGLAFIGV DYALLWAVIA FLFNYIPNIG SIIAAIPAVL LAFIQLGPAA AGGTTMLYIG ANMVMGNVVE PKFMGRGLGL STLVVFLSLI FWGWLLGSVG MLLSVPLTMV VKIALESSKS GSWLAILLSD DVDDKLVVQS SSAHDSTNRV DTHSTDNK
|
| |