Gene SO_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2920 
Symbol 
ID1170609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3051737 
End bp3052843 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content45% 
IMG OID637344733 
Producthypothetical protein 
Protein accessionNP_718490 
Protein GI24374447 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGAT CCAATACGCC GACTGCCGCC TACAAAGGTT TTGCAGTCAT GGCATTTGTG 
GTGATTATTT TGGCAGGGAT AAAGGCCGCA AGCCCGATTG TTGTTCCCTT TGTCTTATCC
TGTTTTATTG CGGTGATCTG TAATCCGGCC ATTGGCTTGA TGACTAAATA TCGTGTGCCT
AAATGGCTCG CGGTGATTCT ATTGATGTGT TTTATCGTGT TGATGGGATT GTGGCTCGCC
TCCTTGGTGG GCAGCTCAAT CAATGAGTTT TCTAAGCAGT TGCCTCAATA CCGAAATCAG
CTGGTGGAGC AGTTTTCTTG GGTGTTGCAT AAATTACAGG CGCTGAATAT TCAAATCTCT
AAGGAGCAAG TGCTAGCCTA TTTTGACCCC GGCATGGCGC TGTCGATGAC CACCAATATG
CTGTCCGGTG TAGGCAATGT GATGGCGAAT TTATTCCTGA TCATTTTGAC CATCGTCTTT
ATGTTATTTG AGGCATCATC TTTACCGAAA AAGTTGCACT TGGCATTGGA TGATCCCGAT
ATGCGTTTGC AACAAATTGA CCGTTTCCTG CAATCGGTGA ATCAATATAT GGTGATCAAA
ACCCTAGTCA GTTTAGCGAC GGGTTTAATT GTTGGTGTTG GACTGGCCTT TATCGGCGTG
GATTATGCGT TACTTTGGGC GGTAATTGCT TTTTTATTCA ACTACATTCC TAATATCGGG
TCGATTATTG CCGCCATCCC CGCCGTATTG TTAGCCTTTA TTCAGTTAGG CCCTGCGGCC
GCTGGTGGGA CGACGATGCT ATACATAGGC GCTAACATGG TAATGGGTAA TGTGGTTGAG
CCTAAATTTA TGGGCCGAGG ATTAGGCCTT TCTACCTTAG TGGTATTTTT ATCATTAATT
TTTTGGGGGT GGTTACTGGG TTCCGTCGGT ATGTTGCTGT CAGTTCCCTT AACTATGGTG
GTCAAAATTG CCCTCGAATC GAGTAAAAGT GGTAGTTGGT TAGCGATATT ATTATCCGAT
GATGTGGATG ATAAACTGGT CGTTCAATCT TCAAGCGCAC ATGACTCGAC GAATAGGGTC
GATACACATT CAACTGATAA TAAGTAG
 
Protein sequence
MTRSNTPTAA YKGFAVMAFV VIILAGIKAA SPIVVPFVLS CFIAVICNPA IGLMTKYRVP 
KWLAVILLMC FIVLMGLWLA SLVGSSINEF SKQLPQYRNQ LVEQFSWVLH KLQALNIQIS
KEQVLAYFDP GMALSMTTNM LSGVGNVMAN LFLIILTIVF MLFEASSLPK KLHLALDDPD
MRLQQIDRFL QSVNQYMVIK TLVSLATGLI VGVGLAFIGV DYALLWAVIA FLFNYIPNIG
SIIAAIPAVL LAFIQLGPAA AGGTTMLYIG ANMVMGNVVE PKFMGRGLGL STLVVFLSLI
FWGWLLGSVG MLLSVPLTMV VKIALESSKS GSWLAILLSD DVDDKLVVQS SSAHDSTNRV
DTHSTDNK