| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2912 |
|---|
| Symbol | pflB |
|---|
| ID | 1170601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3042162 |
|---|
| End bp | 3044444 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637344725 |
|---|
| Product | formate acetyltransferase |
|---|
| Protein accession | NP_718482 |
|---|
| Protein GI | 24374439 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AAACTGAACT GTTTGCCAAC GCATGGGAAG GTTTTACCCC TGGTGATTGG
AAATCTGAAG TCAATGTACG TGACTTTATT CAACAAAACT ACGCTCCCTA TGAAGGTGAC
GAGTCATTCC TAGCCGGTGC CACCGACGCC ACAACCCAGT TGTGGGATAA AGTGATGGAA
GGCATCAAGC AAGAAAACCG TACCCATGCG CCAGTTGATT TCGATACTAA GATGGTTTCT
ACCATCACTT CCCACGACGC GGGTTATATC AATAAAGATT TAGAAACTAT CGTTGGTTTA
CAAACTGATG CGCCGCTCAA ACGCGCTATG TTACCTAACG GTGGTATTCG TATGGTGGAA
AGCTCATGCG CCGCCTACGA TCGCGTGCTA GATGAAGATG TTAAATACAT TTATTCAGAA
CTGCGTAAAA CCCACAACCA AGGCGTATTC GACGTCTATA CCCCAGAAAT CATGGCCTGC
CGTAAATCCG GTGTATTAAC CGGTTTACCC GATGCCTATG GCCGTGGCCG TATCATTGGT
GACTATCGCC GTGTAGCACT TTACGGTATC GACTTCTTAA TGAAGGACAA ATTCGCTCAA
TTCAGCTCAC TGCAAGCGCA GTTCGAAGCG GGTGAAGATT TGTCTAACGT TATCCAACTA
CGTGAAGAAA TTGCTGAGCA GCACCGTGCA TTGGGCCAAA TGAAGAAAAT GGCCGCTAAA
TATGGTTTCG ATATTTCTCG CCCAGCATCC AATGCTAAAG AAGCAATCCA GTGGACTTAC
TTCGGCTACT TAGCCGCAGT GAAGAGCCAA AACGGCGCCG CAATGTCTTT AGGCCGTACT
TCTTCATTCC TTGATATCTA TATCGAACGC GATCTGAAAA ACGGCGTCAT CACTGAGCAA
CAAGCTCAAG AAATGATTGA CCATTTTGTA ATGAAACTGC GTATGGTGCG TTTCCTACGT
ACTCCAGAAT ACGATGAGTT ATTCTCAGGC GATCCAATTT GGGCAACTGA ATCTATCGGC
GGTATGGGCT TAGATGGCCG TACACTGGTG ACTAAATCAA GCTTCCGTTT CTTGAACACG
CTGTACACCA TGGGCCCAAG CCCTGAGCCA AACATCACTG TGCTCTGGTC TGAAAAACTG
CCAGTAGGCT TTAAAAAGTA CTGCGCAAAA GTATCTATCG ACACCAGCTC AATCCAGTAC
GAAAACGATG ACTTAATGCG TCCAGATTTC CAATCTGACG ATTACGCTAT CGCTTGCTGC
GTGAGCCCAA TGGTTGTGGG TAAACACATG CAGTTCTTCG GTGCCCGTGC CAACCTCGCC
AAAACCATGT TGTACGCGAT TAACGGCGGT GTGGACGAAA AACTGAAGAT CCAAATCGCC
CCCAAAGCAG ACCCAATCAC TGACAAAGTA CTGAACTTTG ATGATGTGAT GAATCGCTTA
GACGGTTTAA TGGATTGGTT AGCAACGCAA TATGTCACTT CTCTGAACGC TATTCACTAC
ATGCACGACA AGTACTCCTA TGAAGCTGCG CTAATGGCGC TGCACGACAG AGACGTACGT
CGTACTATGG CTTGCGGTAT TGCTGGACTT TCAATCGCAG CCGACTCACT GTCTGCTATC
AAGTACGCTC AAGTTAAACC TGTACGTGAT GAAAACGGCA TCGCCGTTGA CTTTGAGATC
AGTGGTGACT ATCCAAAATT TGGTAACAAC GACCCACGCG TTGACGATAT CGCCTGTGAC
TTAGTTGAAC GTTTTATGGC GAAAATTCGC GACCGTAAAA TGTACCGCAA CGCGATTCCA
ACTCAGTCAA TTCTCACCAT CACCTCAAAC GTGGTTTATG GTAAGAAAAC GGGTAATACA
CCAGATGGTC GTCGTTCAGG TGCACCATTT GCACCGGGCG CAAACCCAAT GCATGGCCGT
GATGAAAAAG GTGCAATCGC CTCATTAACC TCTGTGGCTA AGCTGCCTTT CGCCCACGCA
CAGGACGGTA TCTCTTACAC CTTCTCCATC GTGCCAAATG CATTAGGTAA AGATGAAGAT
GGTCGCCGCA CTAACTTAGC GGCACTGATG GACGGATATT TTGCCCATAA CGAAGGACAC
GAAGGCGGTC AACACTTGAA CGTCAACGTG ATGAACCGTG AAATGCTTGA GGATGCGGTA
GTCAACCCAG ACAAGTATCC ACAACTGACC ATCCGTGTTT CTGGTTATGC AGTGCGCTTC
AACTCGCTGA CTCCAGAACA GCAGCAAGAT GTGATCACGC GTACATTCAC AAAAGGTCTG
TAA
|
|---|
| Protein sequence | MTDKTELFAN AWEGFTPGDW KSEVNVRDFI QQNYAPYEGD ESFLAGATDA TTQLWDKVME
GIKQENRTHA PVDFDTKMVS TITSHDAGYI NKDLETIVGL QTDAPLKRAM LPNGGIRMVE
SSCAAYDRVL DEDVKYIYSE LRKTHNQGVF DVYTPEIMAC RKSGVLTGLP DAYGRGRIIG
DYRRVALYGI DFLMKDKFAQ FSSLQAQFEA GEDLSNVIQL REEIAEQHRA LGQMKKMAAK
YGFDISRPAS NAKEAIQWTY FGYLAAVKSQ NGAAMSLGRT SSFLDIYIER DLKNGVITEQ
QAQEMIDHFV MKLRMVRFLR TPEYDELFSG DPIWATESIG GMGLDGRTLV TKSSFRFLNT
LYTMGPSPEP NITVLWSEKL PVGFKKYCAK VSIDTSSIQY ENDDLMRPDF QSDDYAIACC
VSPMVVGKHM QFFGARANLA KTMLYAINGG VDEKLKIQIA PKADPITDKV LNFDDVMNRL
DGLMDWLATQ YVTSLNAIHY MHDKYSYEAA LMALHDRDVR RTMACGIAGL SIAADSLSAI
KYAQVKPVRD ENGIAVDFEI SGDYPKFGNN DPRVDDIACD LVERFMAKIR DRKMYRNAIP
TQSILTITSN VVYGKKTGNT PDGRRSGAPF APGANPMHGR DEKGAIASLT SVAKLPFAHA
QDGISYTFSI VPNALGKDED GRRTNLAALM DGYFAHNEGH EGGQHLNVNV MNREMLEDAV
VNPDKYPQLT IRVSGYAVRF NSLTPEQQQD VITRTFTKGL
|
|---|
| |