| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2898 |
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| Symbol | |
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| ID | 1170588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3020980 |
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| End bp | 3024417 |
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| Gene Length | 3438 bp |
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| Protein Length | 1145 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344714 |
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| Product | SMC family protein |
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| Protein accession | NP_718470 |
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| Protein GI | 24374427 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTAA AACAAATAAA ACTTGCCGGC TTTAAGTCGT TTGTCGACCC CACCAAAATT
CCGTTTTTAC AGGCATTAAG CGCTATTATC GGCCCTAATG GCTGTGGAAA ATCAAACGTG
ATTGATGCCG TGCGTTGGGT GCTGGGCGAA AGCTCGGCTA AACACCTGCG GGGTGACTCC
ATGAGTGACG TGATTTTTAA CGGTTCCAGC GCCCGCAAAC CTGTGTCGGT GGCGGGTGTT
GAACTGGTGT TTGAAAATAA AGAAGGCCGT CTCGCTGGCC AATATGCCAG TTATGAAGAG
ATCTCGGTCA AGCGGCAGGT GAGCCGCGAT GGCGAATCTT GGTATTTCCT CAATGGGCAA
AAATGTCGCC GTAAGGATAT TACCGACCTG TTTATGGGCA CAGGGCTTGG GCCGCGCAGT
TATGCCATTA TCGAGCAGGG CACCATCTCG CGACTGATTG AATCAAAACC CCAAGATTTA
CGCACCTTTA TTGAAGAAGC CGCGGGGATT TCTCGCTATA AAGAACGTCG GCGTGAAACT
GAAAGTCGCA TTCGTCACAC CCGTGAAAAC TTAGAGCGTC TTGGTGATAT TCGCAGTGAA
TTAGGCAAGC AATTAGACAA ACTCAGTCAG CAGGCCAAAG CCGCAACACA ATATCGCGAG
CTGAAACAGG CGGAGCGCAA AACCCACGCC GAGTTGCTGG TGATGCGCTT CCAAGAATTG
CAGAGCCAAA TGGCGAGTTT GTCGGAGCAG ATTAACTCAC TTGAGCTGCA GCAAGCGGCG
GCGCAATCCC TAGCGCAAAC TAGCGAATTA GAAAGCACTG AGCTGCAAGT TAAACTTTCG
CAGTTAGCCG AGCAAGAACA GCACGCGGTG GAGGCCTATT ATCTGACGGG CACAGAGATC
GCCAAGTTGG AGCAACAATT ACAGAGCCAA AAGCAGCGCG ATGCCCAGCT GCATACTCAG
CTCGAACAGT TGAGCGAGCA GCTCACCCAA AACAAAGCCA AATTAGATAC TTATCAGGCA
AGTTTTCATG CACTTGAAGC CGAGCTTGGC CAACTTGCAC CACAACATGA GTTGCAGCAA
GAAATGATGG ATGAGCTGCA AGCCCAGTGG GAAATGAGTG TTTCACGTAG TGAAGCTCAG
ACTGAAGTGG CTAGAACTCA AGCGTCGGCT GTTGCCCAAC ATAAGCTGCA ACTCGAATTA
CACCGCAGCA AACTTGTTCA TCAGCAGCAG TTGAATGCCC ATAAAACCCA GTTACACCAA
GAACAGCAGC AAGAGTTGTC CTCGCTCACT GAGCATGCTT TGGAGGATAC CAGCGCATCC
CTTAGTCAAG AAATTGAACT CTTAGAACAA GTAATAACTC AGCAAATTGA AGTGAATCAA
GAGCTTGAGT TAGCGCTTGT TGAAAATACT CAAGCGTTAG ATCTTGCACG CGGCGAATTT
GAGCAGCTGT CACAGCGGTT AACCTCAATG CGAGCACGCT TTGAGCTGGT TGAACAATGG
CTGGCAAAGC AAGAAGAATT AAGCGATAAG CCGCAGCTGT GGCAAAGCAT TCAAGTGGAA
AATGGCTGGG AAGCCGCCGC CGAACTGGCG CTGCAGGGCT TAATGACATT ACCCGTTGGC
GTTAGTGCAA ATGAGCTCGG GTTTTATACA GATGCAAGGT GCTTAGAAAA GATTGATGAT
CATATCGAAG GCTCGCCCAT CAAGTTGCCA GCGGATGTGA ATCTTGCACC TTGGCTTAAT
GGGCTAAAAT GGGCAGATAA TCTTGCCAGC GCCCAAGCGC AGCTTGCTAG CTTGGCGGCC
GATGAGCGGA TTGTCACTGC CGATGGTTAT CTACTCGGCA AAGGGTTTTT GATTGCTAAA
CAAGACAATA GCCAATCCCT TGTGCAACTG AGTAAAGAAC AAACGCAGTT AAGCGAGGCG
ATAGCCGAGT GCGTGCAGGC GCGGGCAATA CAGCAGTCAA AGCTCGATGA GCTTTCGCAG
CAACTCATAC AGGTGCGTGA CAGCGTAAAC CAAGGCACGC AGCGCTTGCA TCAGTTACAG
CTCGATAAAG CCACTAAATC CACCCAGCTT AATAATGCAG AGGCACTAGC CAAGCAGCGC
GAAGCTAAAC GGGGACAACT TGAAGACACT GTCGCGCGAA CGCATGCTGA GTTAGCAGAG
CTTGCCGGGC AGTTAATGCT GCTTGCGGAG CAAGAGGATG AACTCGCTGA CGCCTTAGCG
CAAAGTATTG ATAAACAGCA GCAACAAAGC CAAGACGCCC AAGGGGATTT AGCGCGGCAT
CAAGCGCTTA AGGCTCAAAT AAGCGATACC CAGCGGCGTT TATCAACTCT CAATGCGAGT
TTGCAATCGG TGACGACTCG CATGGCGGTC AGCACCGAGC AAATCGAATT ACAGCGGGTA
CGTGTCAATG AATTAGTCCA GTCTCGGGAA ACGCTGTCTG CCCAGCTTGC CAGTGTCGCT
GAGCTGCATG GCGATCAGCA AACCGCAAAG CTGAGTGAAC AATTGGCGCT GTTACTCAAT
CAACAGCAGA GTCAGCAACA GGCGCTAAAA GCACTTAGGA CACAACAAAG TTCGCTCACT
GAAACGTTAA ACAGTATAGG ATTAAAGCAA AAACAAGAGC TTGGTAAGCT TGAGGGCTTG
ACTCAAAGCC TCAGCACGTT AAAGTTACGT CGTGAGGGAT TAAAAGGGCA GGCCGATAGC
CAGTTGGCAG CCCTGTCGGA GCAGCAAATT GTGCTCGCTC AGATTATTGA TTCTCTGCCT
AGCGACGGTC AGCCAGATAA GTGGCAGCGT GATTTAGATC AGATCCGGCA AAAAATTATC
CGCTTAGGCG CGATAAACCT CGCGGCGATC GAAGAATTTG AGCAGCAAAG TGAGCGAAAA
TCCTATTTGG ATCATCAGGA TGAAGATCTC AATAAAGGAC TTGCAACACT CGAAGAAGCC
ATTCGTAAAA TCGATAAGGA GACCCGTACC CGCTTTAAAG CCACATTTGA TGCGGTCAAT
GAGGATTTGG GACGTTTATT CCCCAAGGTG TTCGGTGGTG GACGGGCATA CTTAGCGCTG
ACGGAAGACG ATTTATTAGA AACGGGCGTG ACCATCATGG CCCAACCCCC AGGTAAGAAG
AACAGCACAA TCCATCTTCT TTCCGGTGGT GAAAAAGCAC TAACCGCTTT ATCATTGGTA
TTTGCGATTT TTAGGTTGAA TCCAGCTCCC TTCTGTATGT TAGACGAAGT GGATGCGCCC
TTAGACGATG CCAACGTAGA ACGTTTCTGT CGATTATTGA AGGAGATGTC GCAGAGCGTA
CAGTTTATCT ATATCAGCCA TAACAAAATT ACGATGGAGA TGGCTGATCA ACTTATCGGT
GTGACTATGC ATGAGCCGGG AGTATCCCGT ATAGTCGCAG TAGATTTAGA GCAAGCGGTG
GCGATGGCCG ACGCGTGA
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| Protein sequence | MRLKQIKLAG FKSFVDPTKI PFLQALSAII GPNGCGKSNV IDAVRWVLGE SSAKHLRGDS
MSDVIFNGSS ARKPVSVAGV ELVFENKEGR LAGQYASYEE ISVKRQVSRD GESWYFLNGQ
KCRRKDITDL FMGTGLGPRS YAIIEQGTIS RLIESKPQDL RTFIEEAAGI SRYKERRRET
ESRIRHTREN LERLGDIRSE LGKQLDKLSQ QAKAATQYRE LKQAERKTHA ELLVMRFQEL
QSQMASLSEQ INSLELQQAA AQSLAQTSEL ESTELQVKLS QLAEQEQHAV EAYYLTGTEI
AKLEQQLQSQ KQRDAQLHTQ LEQLSEQLTQ NKAKLDTYQA SFHALEAELG QLAPQHELQQ
EMMDELQAQW EMSVSRSEAQ TEVARTQASA VAQHKLQLEL HRSKLVHQQQ LNAHKTQLHQ
EQQQELSSLT EHALEDTSAS LSQEIELLEQ VITQQIEVNQ ELELALVENT QALDLARGEF
EQLSQRLTSM RARFELVEQW LAKQEELSDK PQLWQSIQVE NGWEAAAELA LQGLMTLPVG
VSANELGFYT DARCLEKIDD HIEGSPIKLP ADVNLAPWLN GLKWADNLAS AQAQLASLAA
DERIVTADGY LLGKGFLIAK QDNSQSLVQL SKEQTQLSEA IAECVQARAI QQSKLDELSQ
QLIQVRDSVN QGTQRLHQLQ LDKATKSTQL NNAEALAKQR EAKRGQLEDT VARTHAELAE
LAGQLMLLAE QEDELADALA QSIDKQQQQS QDAQGDLARH QALKAQISDT QRRLSTLNAS
LQSVTTRMAV STEQIELQRV RVNELVQSRE TLSAQLASVA ELHGDQQTAK LSEQLALLLN
QQQSQQQALK ALRTQQSSLT ETLNSIGLKQ KQELGKLEGL TQSLSTLKLR REGLKGQADS
QLAALSEQQI VLAQIIDSLP SDGQPDKWQR DLDQIRQKII RLGAINLAAI EEFEQQSERK
SYLDHQDEDL NKGLATLEEA IRKIDKETRT RFKATFDAVN EDLGRLFPKV FGGGRAYLAL
TEDDLLETGV TIMAQPPGKK NSTIHLLSGG EKALTALSLV FAIFRLNPAP FCMLDEVDAP
LDDANVERFC RLLKEMSQSV QFIYISHNKI TMEMADQLIG VTMHEPGVSR IVAVDLEQAV
AMADA
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