| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2889 |
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| Symbol | |
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| ID | 1170580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3011321 |
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| End bp | 3013930 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637344706 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_718461 |
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| Protein GI | 24374418 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC GGCCTAACAT TGAGGCACAA GCCCCGTTAA CCCAATGGCA AAAAAGCCTG
CCGTTCAAAC TCACGTTGAT CCAACTGCTC ATCGCCAGCA TCCTCATTTT CAGCACAGCT
TGGGTCATTC TTAATATTCA GACACAACAA ATCAATGAGC AACAGACTTT ACTGAATCAA
AATCACGGTC AAATTATTAT TGCAAAACTG CAGGAAATGA CCTCTCAAGT CGAAAATCAA
GTCAATGCGA TAAGCCAAAT CGCCATGCTC TACCGCCACG AACCTGAACA GCTCAGCAAA
AGTATTCCCG AATTACTCTC GATTGAAAGT CAAAAAGACA TCATTTCAGG TGGTGGCATT
TGGCCTGAGC CAGGGGCATT TAATCGGCAA AAATTCCGTG ATAGTCTGTT TTGGTCACAC
AATATTCACG GTGAGTTAGT GGCCATCGAC AGCTACAACG ATGACAACTT TCCTAGTTAC
CATACTGAAG AATGGTATCG ACCAACTCGA TTCTTTCCCG CTGGTAAAGT ATTTTGGTCT
AAATCCTATG TTGACCTTAC AACCCATGAA CCAATGGTCA CAGCATCTAG CGCCATGTGG
ATGGAACATC AATTCATTGG TGCAGCGACG ACTGATATCA GCCTAGAAAA ACTCAATCAG
CTCCTGCGTA ATGCTATGTT GAATGTGAGT GGCTATGTAA TGGCACTCGA TCATCAAAAT
CAAATCCTAG CTTTTCCAAA TCGCGATAAT ACACTTCAAT CTCACTCGGA CACGACTCAT
AACCTAATAA GCTTTGATGC ATTTGCTCAA ACCGAGCAAG CATTAACCCC TATCGCCTCG
GCGCTACACT TAGCCGATCG CACCTTTATC GAACAAGCAA TTGCAGAGCG CGTATTTACT
CAAGAGCAAA TGGAGAATCT CACTCGTTTA AGTAAAGATA GCGAGCGGGA TATGCTCTCA
GCCATAGTAA ACGATAATGC CAAAAATCAT TTTTCGACCC CAAAGCGTAT CGCGTTAGTG
TCATTAGCAA TGGATCCTAT CCTAAAGGGG CCTTCGCTTG TCTCAGTCTT TCTTATGCCC
CATACCTATT GGAAAATCTT AGTCGTCACA CCAGTAGCGC CCTTAGAGGA TACAGCGAAA
AAACTGATTG AAAAGGTGGG GCTTTCTTTA GTACTCATTC AAATGTTTGG CCTTATATTA
CTGTTTATAC TGCAACACAA GCTCATCATG GCGCCCATAA TGGAAATGGT CAAAGCACTC
AAACGTAATG ACTCAGCCTC CATCGAACTA AAAGCCAAAG AACGTCACGA TGAAGTCGGA
TTACTGGCAA AAACTTTTTT ATCACGTACT CAGCAGCTTG AAATCGCTAT GTCGAGTTTA
GATGCCAGCA ATCTCGCTCT GGAGCAACAG TTACTCAGCC AACAGCACTT TCAACAGGAA
TTAAATAGAC ATAAAGAACA ATTAAGATCC TTATTAGACT ATTCATCTAC TATCATTTAT
ATCAAAGACT TAAATGGTAG ATACACCTTA GTCAACAACA AATACTGTGA GGTGCTTGGT
ATCGAGCGCC GCAAAATTAT TGGTGCAATG GATTTTGAAC TCTTTCAACC TCCTCTCGCC
GAGCTGTACC AACAGAACGA TCAAAGGGCA AATAACAGTC ACGATGCTCT GCATTTTGAA
GAACCCATTC CCACTCCCCG TGGCGAAATT ATCTACCACA TGACTAAGTT TGATATCAGA
GATGACGAGG ATAACTCTAT CGGTGTTGGC GCGATTGGAT TTAATGTGGA TCTGAAAAAA
CGCCAAGAGA AAGAACAAGA AAAACTCCTG CAATACCAAT TGAATCAGCT AAAAGATCAA
CAGCATAAAA CCCAGTTAGC CCAACAAGAA ATCGCCCAAT TAAGGGCGCA GTTAACTGAT
GCCAATGATG AAATTAACCT GCAAACTCAG CTAAACCGCA ATAAGCAACA AAGTCAAAAG
CTGATGCAAC ACTTCTTGTC TGACGTAATG AACCAAATGA TGCAAGAGCA GGATCGCCTG
CTTGCTCAAG TTTGCCAACA CAAAGATGCC GATCAGCATA CCCACGTAGT GCAACTCATG
AGTCAACAAG CGGCCAGACT AAGGCAAATA TCGCAACTCT TTACTGTTCA GCAGAGTGAG
ATAAGACCGC TTCATTTAGC ACAATTTTTT CAACATTTAC TGAGCCTGTT GCAGCCACAA
TTACTCAAAG CACAGGTCAA AGTAAGCCTT AGTTGCGATG AACAATTAGT GATCGATGGC
GATGCTTGGC AATATCTGCA ATTTTTCTAT CGATTACTCA ATAACACCCT ACAGCATGCA
TTTAAAGATC ATCATCAACA CCGAGAATTA CTGCTACAAC TCAAAAAACA AGGTCATGAG
CTACAGCTAT TAGTTAAGGA CAATGGTGTT GGACTATCGG CGTCAAAACT TGAACAATTA
AGACATGAAA TGCAGCAAAA ACAATGCACA GGCACGCTAT CAAGCCTAAA CCTATGGATA
AAGGATGAGT TAAAAGGCGA ACTCAATATA AAGAGCGAAC TCAATCAAGG CACGCGTATC
GAATGCCATT GGCCGCTATC TAAGGCTTAG
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| Protein sequence | MDKRPNIEAQ APLTQWQKSL PFKLTLIQLL IASILIFSTA WVILNIQTQQ INEQQTLLNQ
NHGQIIIAKL QEMTSQVENQ VNAISQIAML YRHEPEQLSK SIPELLSIES QKDIISGGGI
WPEPGAFNRQ KFRDSLFWSH NIHGELVAID SYNDDNFPSY HTEEWYRPTR FFPAGKVFWS
KSYVDLTTHE PMVTASSAMW MEHQFIGAAT TDISLEKLNQ LLRNAMLNVS GYVMALDHQN
QILAFPNRDN TLQSHSDTTH NLISFDAFAQ TEQALTPIAS ALHLADRTFI EQAIAERVFT
QEQMENLTRL SKDSERDMLS AIVNDNAKNH FSTPKRIALV SLAMDPILKG PSLVSVFLMP
HTYWKILVVT PVAPLEDTAK KLIEKVGLSL VLIQMFGLIL LFILQHKLIM APIMEMVKAL
KRNDSASIEL KAKERHDEVG LLAKTFLSRT QQLEIAMSSL DASNLALEQQ LLSQQHFQQE
LNRHKEQLRS LLDYSSTIIY IKDLNGRYTL VNNKYCEVLG IERRKIIGAM DFELFQPPLA
ELYQQNDQRA NNSHDALHFE EPIPTPRGEI IYHMTKFDIR DDEDNSIGVG AIGFNVDLKK
RQEKEQEKLL QYQLNQLKDQ QHKTQLAQQE IAQLRAQLTD ANDEINLQTQ LNRNKQQSQK
LMQHFLSDVM NQMMQEQDRL LAQVCQHKDA DQHTHVVQLM SQQAARLRQI SQLFTVQQSE
IRPLHLAQFF QHLLSLLQPQ LLKAQVKVSL SCDEQLVIDG DAWQYLQFFY RLLNNTLQHA
FKDHHQHREL LLQLKKQGHE LQLLVKDNGV GLSASKLEQL RHEMQQKQCT GTLSSLNLWI
KDELKGELNI KSELNQGTRI ECHWPLSKA
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