| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2886 |
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| Symbol | nhaB |
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| ID | 1170577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3008481 |
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| End bp | 3010082 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637344703 |
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| Product | sodium/proton antiporter |
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| Protein accession | NP_718458 |
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| Protein GI | 24374415 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATGA CAATGAGTCA GGCGTTTATT GGAAACTTCT TAGGGAACTC TCCTAAGTGG
TACAAAATCG CAATACTGTC GTTTTTAATA ATCAATCCAA TACTCTTTTT CTATGTCAGC
CCCTTTGTGG CTGGTTGGGT ATTAGTGCTT GAGTTTATTT TTACTTTGGC AATGGCATTA
AAATGTTATC CATTGCAACC CGGCGGATTG TTAGCCATTG AAGCGGTTGC GATTGGTATG
ACTTCAGCCA GTCAGGTGCT ACATGAAATT GAAGCCAACC TTGAAGTGTT ATTATTGTTA
GTATTTATGG TTGCTGGCAT TTACTTCATG AAGCAACTGC TGCTATTCGC GTTCACTAAG
ATGATCACCA AAGTCCGTTC AAAAATCTTA GTGTCATTGT TATTTTGCTT AGCTTCTGCA
TTCTTATCCG CTTTTTTAGA TGCCCTAACT GTTATCGCAG TGATTATTAC TGTAGCCGTT
GGTTTTTACT CTATTTATCA CAAAGTGGCA TCGGGTAAAG ATTTCTCTGC GGATCATGAC
CATACCTCAG AGAATAAAAA CGAGGAAGGT GAAGACCAAC TCAATGAAGC AGAACTTGAA
TCCTTCCGTG GCTTCTTACG TAACTTATTA ATGCACGCCG GTGTTGGTAC TGCTTTAGGT
GGCGTGTGTA CAATGGTGGG TGAACCACAA AACTTAATTA TTGCGGCACA AGCTAACTGG
CAGTTTGGTG AGTTTGCGAT TCGTATGTCA CCAGTCACGG TACCAGTCTT TATTGCGGGC
ATCTTAACCT GCTACATAGT GGAGAAATTC CGTATCTTTG GATATGGTGC TCAACTTCCT
GATGCTGTTC ATAAAATTCT GTGCGATTAC GATGCGCATG AAGATGCTCG TCGAACCAAT
AAAGATAAAA TGAAGCTTAT TGTTCAAGCC TTCATTGGAG TTTGGTTAAT TGCTGGTCTT
GCTCTGCACT TGGCTTCTGT TGGCTTGATT GGTCTGTCAG TCATCATTTT AGCCACTGCA
TTTAACGGCA TAACCGATGA ACATGCGCTG GGTAAAGCCT TCGAAGAAGC CCTGCCCTTT
ACCGCACTGT TAGCCGTTTT CTTTTCCGTT GTTGCTGTGA TTATCGACCA ACAATTGTTT
GCTCCGGTGA TCCAATGGGC ACTAAACCAT GAAGGTAATA CCCAATTAGT GATTTTCTAT
ATTGCTAACG GTTTACTCTC CATGGTCAGT GATAACGTGT TTGTAGGGAC TGTCTACATT
AACGAAGTGA AAGCGGCCTT GCTCAATGGT CAAATCACTC GCGATCAATT CGACCTACTG
GCCGTGGCAA TTAACACAGG TACTAATTTA CCTTCTGTTG CAACCCCCAA TGGTCAAGCC
GCCTTCCTAT TCTTATTGAC ATCAGCACTT GCACCACTGA TCCGTTTGTC CTATGGCAGA
ATGGTATGGA TGGCATTGCC CTACACTATC GTCCTGTCGA TTGTGGGTGT CATGGCGATT
CAAATCGGAT TCTTAGAACA AATGACCCAG TATTTCTATG ACTCCCACGC AATTTTACAC
CACAGTGTTA AAGAAGCCTT AGCGCCAGCG ACAGGCCACT AA
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| Protein sequence | MPMTMSQAFI GNFLGNSPKW YKIAILSFLI INPILFFYVS PFVAGWVLVL EFIFTLAMAL
KCYPLQPGGL LAIEAVAIGM TSASQVLHEI EANLEVLLLL VFMVAGIYFM KQLLLFAFTK
MITKVRSKIL VSLLFCLASA FLSAFLDALT VIAVIITVAV GFYSIYHKVA SGKDFSADHD
HTSENKNEEG EDQLNEAELE SFRGFLRNLL MHAGVGTALG GVCTMVGEPQ NLIIAAQANW
QFGEFAIRMS PVTVPVFIAG ILTCYIVEKF RIFGYGAQLP DAVHKILCDY DAHEDARRTN
KDKMKLIVQA FIGVWLIAGL ALHLASVGLI GLSVIILATA FNGITDEHAL GKAFEEALPF
TALLAVFFSV VAVIIDQQLF APVIQWALNH EGNTQLVIFY IANGLLSMVS DNVFVGTVYI
NEVKAALLNG QITRDQFDLL AVAINTGTNL PSVATPNGQA AFLFLLTSAL APLIRLSYGR
MVWMALPYTI VLSIVGVMAI QIGFLEQMTQ YFYDSHAILH HSVKEALAPA TGH
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