Gene SO_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2883 
Symbol 
ID1170574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3004305 
End bp3005573 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content45% 
IMG OID637344700 
Producthypothetical protein 
Protein accessionNP_718455 
Protein GI24374412 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACT TTATCGATAG ACGGTTGAAT GCGAAAGGAA AAAGCACAGT CAACCGCCAG 
CGCTTTATCA ACCGATACAA GCAACAAATC AAAAAAGCTG TCAGCGATGC CGTCACGCGT
CGCAGTGTAA CGGATGTAGA TAAAGGCGAA AAAATCAGTA TCCCCACACG GGATATCAGT
GAACCTATGT TCCATCAAGG CAAAGGAGGC GTGAGAGACA GAGTTCACCC TGGAAATGAT
CAGTTCACCC GCGGCGATAA AATCGATAGG CCTCAGGGAG GCTCTGGCGG CGGTGCGGGT
AAAGGTGATG CCTCCGATTC GGGTGAAGGT AATGATGACT TTGTGTTTGA AATATCCAAA
GATGAATACC TTGAATTGTT ATTTGAGGAT TTAGAGCTCC CTAATCTGCA AAAAAATCGC
CTCAACAAGC TCGTTGAGTA TCAAATCTAC CGCGCTGGAT TCACCAATGA TGGTGTTCCC
GCCAATATCA ACATTGTGCG CTCCTTACGT TCATCATTGG CGCGCCGCAT TGCCATGTCA
GCGAGTAAAA AGAAATTACT CAAAGAGTCA GAGCAAGAAC TGGCCGAACT TGAAAATATT
CCAGGGACAA AAGCTGAGCT TATCTTGGAT CTAAAAGCGC AAATTGAAGA GTTAAAGCGG
AAAATCGCCA AGGTACCGTT TATCGATACC TTTGACTTAC GCTTCAATAA CTTTTCAAGG
CGTGAAGTGC CTTCAAGCCA AGCGGTAATG TTCTGCTTAA TGGACGTGTC AGGTTCTATG
GATCAAGCCA CAAAAGATAT GGCAAAACGT TTTTATATCC TGTTGTATTT GTTCCTCACC
CGCACCTACA AAAACCTTGA AGTGGTGTAT ATCCGTCACC ATACCCAAGC GAAGGAAGTG
GATGAACATG AGTTCTTTTA CTCCCAAGAA ACGGGCGGCA CTATCGTTTC GAGCGCATTG
AAATTAATGC ACGAAATTCA GCAGGCGCGC TACCCTGCCG ATGAGTGGAA TATCTATGCG
GCACAAGCCT CTGACGGCGA TAACTGGGCC GATGATTCTC CCACCTGTAA GCAATTATTA
GAGCAAAAAA TCCTGCCGTT AGTGCGTTAC TTTAGCTATA TCGAAATCAC CAACCGCGCC
CATCAAACCC TGTGGCGTGA ATACGAATCC CTACAACAAC ACTACGACAA CATAGCAGTG
CAACACATTC GTCAAGCCGA AGATATCTAC CCTGTGTTTA GAGAATTATT CAAAAAACAG
GCAGTTTAA
 
Protein sequence
MANFIDRRLN AKGKSTVNRQ RFINRYKQQI KKAVSDAVTR RSVTDVDKGE KISIPTRDIS 
EPMFHQGKGG VRDRVHPGND QFTRGDKIDR PQGGSGGGAG KGDASDSGEG NDDFVFEISK
DEYLELLFED LELPNLQKNR LNKLVEYQIY RAGFTNDGVP ANINIVRSLR SSLARRIAMS
ASKKKLLKES EQELAELENI PGTKAELILD LKAQIEELKR KIAKVPFIDT FDLRFNNFSR
REVPSSQAVM FCLMDVSGSM DQATKDMAKR FYILLYLFLT RTYKNLEVVY IRHHTQAKEV
DEHEFFYSQE TGGTIVSSAL KLMHEIQQAR YPADEWNIYA AQASDGDNWA DDSPTCKQLL
EQKILPLVRY FSYIEITNRA HQTLWREYES LQQHYDNIAV QHIRQAEDIY PVFRELFKKQ
AV