Gene SO_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2877 
Symbol 
ID1170568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2997457 
End bp2998167 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID637344694 
ProductDNA replication initiation factor 
Protein accessionNP_718449 
Protein GI24374406 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR03420] DnaA regulatory inactivator Hda 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCATTAA ACTCACCGCT ACAACTTTCA TTACCGGTTT ACCTGCCGGA CGATGAAACT 
TTTAATAGTT ATTATCCAGC AGCGGGTAAT GATGAACTTA TTCAAAAACT GCGCGCCAAT 
GCTGAGGGGC ATGGTGAGGC GGCCATTTAT GTTTGGGGAC CGGTAAAATC GGGTCGCACT 
CACCTAATGC ATGCCGCCTG TGCCCATGCT AATGAACTCG ACCGTCGCAG TTTTTATTTG 
CCACTAGGGA TCCATGCGAG TATTTCAACA GCTTTATTGG AAGGCTTGGA ACAACTTGAT 
TTGATCTGTA TTGATGATGT GGACGACATC GCAGGCCATC CGGTTTGGGA AGAGGCCATT 
TTTGATCTGT ACAATCGCGT TGCCGAAAAT AAGCGTTGCG CACTGGTAGT TAGCGGTCGG 
TCTGCACCAG CGGATGCAGG ATTTTTATTG CCCGATTTAG TCTCAAGAAT GCAGTGGGGA 
CTTAATTATC AACTGCAGCC GATGGCAGAT GATGAAAAAC TCGCGGCATT GCAACGCCGT 
GCCGCCATGC GTGGGCTGCA ATTACCAGAA GACGTTGGGC GCTTTTTACT CAATCGTATG 
GCAAGGGACT TACGTACCTT GTTTGATGTA TTAGATAAAC TTGATAAGGC ATCTTTAGTA 
CATCAGCGTA AACTCACCAT TCCTTTTGCA AAAGAAATGC TGCACCTCTG A
 
Protein sequence
MPLNSPLQLS LPVYLPDDET FNSYYPAAGN DELIQKLRAN AEGHGEAAIY VWGPVKSGRT 
HLMHAACAHA NELDRRSFYL PLGIHASIST ALLEGLEQLD LICIDDVDDI AGHPVWEEAI 
FDLYNRVAEN KRCALVVSGR SAPADAGFLL PDLVSRMQWG LNYQLQPMAD DEKLAALQRR 
AAMRGLQLPE DVGRFLLNRM ARDLRTLFDV LDKLDKASLV HQRKLTIPFA KEMLHL