Gene SO_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2853 
Symbol 
ID1170548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2976946 
End bp2978010 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content46% 
IMG OID637344674 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionNP_718425 
Protein GI24374382 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACG CCACAATCAC TGGCTGGGGA AAATGTGTTC CACCCGCCAC TTTGACTAAC 
GATGACCTTG CTACTTTTAT TGAAACATCC GATGAATGGA TTAAATCACG CACAGGGATC 
AGTCAACGTC ATATCAGCCA TGTGAACACC TCGGAATTAG CCTCAGTTGC CGCCAAACGA 
GCTCTAGCAG CAGCAGGGAT TGAAGGTAGC GAAATTGATA TGATCATTTT AGCAAGTGCC 
AGCCCTGACA CCTTAATTCC CAATATCGCC TCGACCGTTC AAGCCAATAT TGGCGCAAAC 
TGCGCAGCCT TTGATATCAA CGCCGCATGT AGTGGCTTTC TCTATGGTTT AGGGCTGGCC 
AGCTCACAGA TCAAAAGTGG TCAATGCAAG AAAGTATTAG TGGTGGGTGC CGAACGCTTA 
TCATTTTATC TAGATTGGTC ACGCCGTGAA ACTGCCGTGT TGTTTGGTGA CGGTGCTGGT 
GCAGTTGTGG TTGAAGCCAC CGATATCCCA GGTGGCGTAT TAGGCTATGA ACTGAATAAC 
GATCCCGATG GCCGCGATAT CCTAAAAGCG GGGTTTGGCA CCGCAATGGA TCGATTCTCC 
GCCGACTCAT TAGACTTTTA TATTCAATTT GATGGCCAAG AAATCTTTAA ACGTGCCATT 
AATGGTATGA ATAAATTAAG CACGCAAGTG CTCGAAAAAT GTGGTGTGGA CAAAGATGAA 
GTCGATTTAG TGATCCCACA CCAAGCGAAT GAACGCATCA TTGATACCCT CGTCAGCCGC 
ATGAAGATCC CTAAAGAAAA AGCCTTTGTG AATATTGCTA ACTATGGCAA TACATCGGCG 
GCAACTATTC CAATCGCGAT TTGTGATGCA CTCGAAAAAG GGTTAATTAA ACCTAACCAA 
ACCATTCTTT CTTGCGCCTT TGGTGCGGGA TTAACCTCTG CTGCATTGCT ATTGCAATGG 
GGTGAGCGTG TCACGCCAGT GCAAATCAGT GACGCCCAAT TACCGCCTTG CGATCAATCC 
GGCATTGAGT TAGTCAAACG CGCCGTGGAT TATTTCTGTA AGTAA
 
Protein sequence
MQYATITGWG KCVPPATLTN DDLATFIETS DEWIKSRTGI SQRHISHVNT SELASVAAKR 
ALAAAGIEGS EIDMIILASA SPDTLIPNIA STVQANIGAN CAAFDINAAC SGFLYGLGLA 
SSQIKSGQCK KVLVVGAERL SFYLDWSRRE TAVLFGDGAG AVVVEATDIP GGVLGYELNN 
DPDGRDILKA GFGTAMDRFS ADSLDFYIQF DGQEIFKRAI NGMNKLSTQV LEKCGVDKDE 
VDLVIPHQAN ERIIDTLVSR MKIPKEKAFV NIANYGNTSA ATIPIAICDA LEKGLIKPNQ 
TILSCAFGAG LTSAALLLQW GERVTPVQIS DAQLPPCDQS GIELVKRAVD YFCK