Gene SO_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2852 
Symbol 
ID1170547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2976182 
End bp2976853 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID637344673 
ProductGntR family transcriptional regulator 
Protein accessionNP_718424 
Protein GI24374381 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAA CTACGCCTAT AGTCCATAAA ACCCGCACCC AATTAGTTGT AGAAGTGCTC 
AGAGAGAAAA TTCTTTCGGG TGAGATAGCC GCAGGAGAAC CACTCAGACA AACTGCTTTA 
GCCGAAGCCT TGCATGTTAG CCGTATTCCA GTAAGGGAGG CCTTGCTGCA ACTTGAAGCT 
GAAGGGCTGG TAAAATTCGA ACCTCACAAA GGGGCTACGG CAACTGAATT ATCCGTTGCA 
CAAGTCACCG AGCTGTTTGA ATTACGTGCA ATGATCGAAA CCGATCTGCT CGCTAAAGCC 
ATACCACAAC TTCAAGCAGA AGATTTAATA AAAGCTGAAC GCGTATTGGA ACAATTGGAA 
TCAGCCTTTA AACACGAAGA TGCCGTTGCC AGTTGGAGCG AGCTAAATAC ACAGTTTCAT 
ACCTGTTTGT ACCAAGCAGC TAATCGCCCA CATACGCTCG AGGTTGTTCA TGGCCTCAAT 
ACCAACTGCG ATAGATATAT TCGTTTGCAA TTGCTGCTCG CAGGAGGGAT ACCCGCAGCA 
GAACACGAGC ACCGTGAGCT GCTCAACTAT TGTAAGCAAA GAGAAACTGA GAAAGCCACG 
GCGTTGCTGC GACATCATAT TTTGCATGCC GCAACGACAA TTCGGGATCT TGTCGCCAAA 
CAGGTGGTAT AG
 
Protein sequence
MSRTTPIVHK TRTQLVVEVL REKILSGEIA AGEPLRQTAL AEALHVSRIP VREALLQLEA 
EGLVKFEPHK GATATELSVA QVTELFELRA MIETDLLAKA IPQLQAEDLI KAERVLEQLE 
SAFKHEDAVA SWSELNTQFH TCLYQAANRP HTLEVVHGLN TNCDRYIRLQ LLLAGGIPAA 
EHEHRELLNY CKQRETEKAT ALLRHHILHA ATTIRDLVAK QVV