| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2844 |
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| Symbol | |
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| ID | 1170540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2963712 |
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| End bp | 2964911 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344661 |
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| Product | exonuclease SbcD, putative |
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| Protein accession | NP_718416 |
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| Protein GI | 24374373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTTA TTCACACCTC AGACTGGCAT ATTGGCCGTC AGTTACATAA TCAATCATTA
CTGGATGATC AGGCCTATGT ACTTGATCAA ATTGTTGCAT TGGCGCAGCA GCACAGTGTT
GATGCGGTGA TTATTGCGGG GGACATTTAC GATAGATCGA TTCCACCCGG CAGTGCCGTC
GCTTTGCTTA ATGATGTGCT TAATCGCCTT GTTAACCAAT TGGGTATACA AGTGCTGATG
ATTGCTGGTA ATCACGATGG CCATGAGCGT TTGGGATTTG CCGCGAAACA AATGGCTGCT
AGCGGTTTAC ATATTATTGG GCCGCTACAA GCCGAATTAG TGCCTATTCG TTTAACCAGT
CCCAGTGGCG ATGCTTACTT TTATCCGCTT CCTTATGCCG AACCTACCAC CGTGCGTCAA
GTGTTTGAAA CCGATGCCAA GGGCCTTAGC GTATCGAGTC ATGAAGAGGC GATGGCGTTA
TTACTAGAAC AGGTCCGCTC CCATGATAGC CAAGGTTTAC CTAAAGTAGT GGTGAGTCAT
TGCTTTTTGG ATGGTGGCAG CGAGTCTGAA TCCGAACGGC CATTAAGTAT CGGCGGTGCG
GATAAAATTA CCCCACGGCT GTTTAGTGAG TTTGACTATG TCGCTCTTGG GCATTTGCAT
GGTCCGCAAT ATAAAGGCTG CGAACAGGTG CGGTACTCAG GCTCAATCCT AAAATATTCC
TTTAGTGAGC AACATCAGCA TAAGTCTGTC ACCTTAGTCG ATATCGCTGC GCAATTTCCC
GCTCAAATCC AACTCTTACC CTTAACCGCA CTGCGCGATC TGCGGATGAT TGAAGGGGAA
TTGGCAAACT TGCTAGAAGA AGGGAGAACC GATGCCAAGC GTGAGGATTA TCTGATGGTG
AGACTCCTCG ATAAACACGC CATTTTAGAT GCCATGGGCA AACTGCGCAG TGTTTATCCC
AATGTACTGC ATTTAGAACG CACCGGATTG ATGGCGGGCG ATCAAGCGGT TGTGCTCAAT
CGAGATCATA TTAAAAAAGG TGAAATGGCC ATGTTCCGTG ACTTTTTTGC CCAAGTCTCG
GGGGATGAAT TAACGCCGGC GCAGCAGGCG GTGATGGAGG ATATCCTAAC CCAACTTCAT
CGAGACGGGC TCGAACGCAG CGAAACACAT CGTGACGTAA AAGAGGAGCA GGCAGAATGA
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| Protein sequence | MRFIHTSDWH IGRQLHNQSL LDDQAYVLDQ IVALAQQHSV DAVIIAGDIY DRSIPPGSAV
ALLNDVLNRL VNQLGIQVLM IAGNHDGHER LGFAAKQMAA SGLHIIGPLQ AELVPIRLTS
PSGDAYFYPL PYAEPTTVRQ VFETDAKGLS VSSHEEAMAL LLEQVRSHDS QGLPKVVVSH
CFLDGGSESE SERPLSIGGA DKITPRLFSE FDYVALGHLH GPQYKGCEQV RYSGSILKYS
FSEQHQHKSV TLVDIAAQFP AQIQLLPLTA LRDLRMIEGE LANLLEEGRT DAKREDYLMV
RLLDKHAILD AMGKLRSVYP NVLHLERTGL MAGDQAVVLN RDHIKKGEMA MFRDFFAQVS
GDELTPAQQA VMEDILTQLH RDGLERSETH RDVKEEQAE
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