| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2838 |
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| Symbol | |
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| ID | 1170534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2955718 |
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| End bp | 2957067 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344655 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_718410 |
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| Protein GI | 24374367 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGTTTA CTGATTTTTC TCTGGACCAG CGTCTGTTAC AAAGCTTAAA GCATATGGGG
ATTGCAACCC CAACCGCCAT CCAGGAACAA GCCTTACCTA TCGCCTTGGC AGGTAAAGAT
TTAATGGCAT CGTCAAAGAC CGGGTCAGGT AAGACCTTGG CGTTTTTGCT GCCCGCATTG
CAAAGGGTTA TCTCCACCCG CGCCCTCAGT AAGCGCGATC CTAGAGTATT AATTTTATTA
CCGACCCGCG AATTGGCCCA TCAGGTTTAT AGCCAGTTAC GTCTACTGGT TGCTAACACC
CAATATAAGG CAATTAGTGT ATTGGGTGGC GAAAACTTTA ACGATCAAGC CAAAGCGCTA
GCAAAAGAGC CGCATTTTAT TGTGGCAACG CCAGGGCGAA TCGCCGATCA CTTAGAACAA
AAAAATTTAT TTCTCAATGG ATTAGAACTA TTAATCCTCG ATGAAGCCGA CCGCATGTTG
GATTTAGGCT TTGCGCCACA GTTAAAAGCT ATCAACGAGG CAGCCGATCA TAAACGTCGT
CAGACCTTAA TGTTCTCAGC AACGTTAGAT CATAGTGAAA TCAATGAGAT TGCGGCAGCG
TTACTCAAGA ATCCATTACA TGTTGCGATT GGCACTGCTC ACGCTGAACA TCAGGATATT
TCGCAGCGGA TTTATCTGTG CGATCACTTA GATCACAAAG AGGCCCTACT CAGTCGTTTG
CTTAGCGATG AGTCACACAA ACAAGTGATC ATTTTTACCG CCACCCGTGC CGATACAGAA
CGTTTAGCCG CAAAACTCTC GGCTCAAGGT TTTGCGACCG CCGCCTTGAG TGGCGAGTTA
AAACAAGCGG CACGTAATCA GATCATGGAC CAATTTGCCC GTGGCCAACA GCAAATACTG
GTAACCACAG ATGTGGCATC CCGAGGCTTA GACTTACTGA ATGTCTCCTT AGTTATCAAC
TTCGACATGC CGAAATTTGC CGAAGAATAT GTCCACCGCA TTGGCCGTAC GGGTCGTGCA
GGCGCAAAAG GTGATGCGAT ATCCTTAGTC GGTCCAAAAG ATTGGGATAG CTTTAAAAAA
GTACAACTTT TCTTAAGAAA AACCTTTGAA ATCAGTGTAA TTAAAGGGCT TGAAGCTAAA
TTTACTGGTT TAAAAGATAA GCCAAAGTCC GTCGCGACTA AAGGTGTGGT CAAGGCAAAC
ACAAAGGGTA AATCTAAGCC CAAGCCGAAC GTCGTTAAAG CAGCGCCATC ACGTGATAAA
CGCTTTATCA CGGGTGTTGA TGTCGGTGAT GCGCCAATGC GCAAAAAACC TAAGGCACAG
CTGCTGCAAG AGAGTGACGA CGAGATCTGA
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| Protein sequence | MQFTDFSLDQ RLLQSLKHMG IATPTAIQEQ ALPIALAGKD LMASSKTGSG KTLAFLLPAL
QRVISTRALS KRDPRVLILL PTRELAHQVY SQLRLLVANT QYKAISVLGG ENFNDQAKAL
AKEPHFIVAT PGRIADHLEQ KNLFLNGLEL LILDEADRML DLGFAPQLKA INEAADHKRR
QTLMFSATLD HSEINEIAAA LLKNPLHVAI GTAHAEHQDI SQRIYLCDHL DHKEALLSRL
LSDESHKQVI IFTATRADTE RLAAKLSAQG FATAALSGEL KQAARNQIMD QFARGQQQIL
VTTDVASRGL DLLNVSLVIN FDMPKFAEEY VHRIGRTGRA GAKGDAISLV GPKDWDSFKK
VQLFLRKTFE ISVIKGLEAK FTGLKDKPKS VATKGVVKAN TKGKSKPKPN VVKAAPSRDK
RFITGVDVGD APMRKKPKAQ LLQESDDEI
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