Gene SO_2831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2831 
SymbolribA 
ID1170528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2948996 
End bp2949607 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content44% 
IMG OID637344649 
ProductGTP cyclohydrolase II 
Protein accessionNP_718403 
Protein GI24374360 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA AATATGTCGC GACGTCAAAA TTACCCACTC CTTGGGGCGT TTTTGCCATG 
CACGGTTTTG AAGATACTGA AACAGGCAAA GAGCATGTTG CCCTTACGTT TGGCTCCCTA 
AGTAGCGATG AACCTGTATT AGGTCGTATT CACTCAGAAT GTCTCACCGG CGATGCCTTG 
TTCAGTTTAC GCTGTGATTG TGGATTCCAG CTACAAACCG CAATGCAGAA CATTGCTGAA 
ACGGGAAGTG GTTTTATTTT GTATTTACGC CAAGAAGGCC GTGGTATTGG TTTGCTAAAC 
AAGATCCGCG CCTATGAGTT GCAGGATAAA GGTGCCAATA CGGTTGAGGC GAATGAGCAG 
TTAGGTTTTC CGGCGGATAT GCGTAAATAC GATATGATCC AGCCTATGCT TGAAAAAATT 
GGTGTGAAGC ACGTACGCTT AATGACCAAT AATCCTCGCA AAGTCAAAGC GATGAAAGAA 
ATTGGTATTG AGGTAGTTGA ACGAGTACCG CTACAAGTGG GTAAAAACCG TTACAATGAA 
GCTTACCTAA AGACGAAATC CACTGAGCTT GGGCATATGA TGTCTGAGTA TCATTTTACG 
GATGAAGAGT AG
 
Protein sequence
MSIKYVATSK LPTPWGVFAM HGFEDTETGK EHVALTFGSL SSDEPVLGRI HSECLTGDAL 
FSLRCDCGFQ LQTAMQNIAE TGSGFILYLR QEGRGIGLLN KIRAYELQDK GANTVEANEQ 
LGFPADMRKY DMIQPMLEKI GVKHVRLMTN NPRKVKAMKE IGIEVVERVP LQVGKNRYNE 
AYLKTKSTEL GHMMSEYHFT DEE