Gene SO_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2778 
SymbolfabH-1 
ID1170478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2899962 
End bp2900921 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID637344607 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionNP_718359 
Protein GI24374316 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACAA AAATTCTCGG AACTGGTAGT TACGTACCGG TGCAGGTGCG TAGTAATCAA 
GATTTGGAAA AAATGGTGGA AACCAGTGAC CAATGGATTG TGGAACGCAC TGGTATTTCA 
GAGCGTCGCA TTGCGGCGCA AGATGAAACA GTCTCAACTA TGGGCTATCT GGCGGCATTA 
AATGCGCTAG AGATGGCCGG CATAGAAGCA TCAGATTTAG ATATGATCAT TTGTGGCACC 
ACCAGTGCGG CAAATGCATT CCCAGCAGCA GCATGCGAAA TTCAAGCGAT GCTTGGCGTT 
CATACCATTC CGGCCTTTGA TATTGCGGCG GCCTGTTCCG GTTTTGTCTA TGCCTTATCT 
GTAGCAGACC AATTCGTTAA AAATGGTACC GCGAAAAAAG TGCTCGTCAT TGGTGCAGAC 
GTATTGTCCC GCCTATGCGA GCCAGAAGAT CGCACCACCA TTATTCTGTT TGGTGATGGC 
GCGGGTGCGG CAATTATCGG TGCCTCCGAT GAGCCTGGGA TTATCTCTAC CCATATTTAC 
GCTGATGGTC GTCAAGGTGA CTTGCTGAAA TGTGCTTTTC CACCGCGTCA AGGAGAAACT 
TCCGAAGCGG TAGGGTTTAT GACCATGAAA GGTAATGACG TCTTTAAAGT GGCTGTCACG 
CAGTTATCTC ATGTCGTGAC TGAAACATTA CGCCTTAATA ATATCGACAA GTCGGAAATC 
GACTGGTTGG TGCCGCATCA GGCGAATTTC CGCATTATTA ATGCCACGGC GAAAAAGCTC 
GATATGAGCT TAGATAAAGT GGTATTAACA CTGGCTAAGC ACGGTAACAC GTCAGCGGCA 
TCGGTGCCGA TTGCCTTGGA TGAAGCCGTT CGTGATGGCC GGATCCAACG TGGCCAGTTG 
TTGCTGCTCG AAGCCTTTGG TGCTGGTTTT GCGTGGGGCA GTGCGCTCGT CCGTTTTTAA
 
Protein sequence
MHTKILGTGS YVPVQVRSNQ DLEKMVETSD QWIVERTGIS ERRIAAQDET VSTMGYLAAL 
NALEMAGIEA SDLDMIICGT TSAANAFPAA ACEIQAMLGV HTIPAFDIAA ACSGFVYALS 
VADQFVKNGT AKKVLVIGAD VLSRLCEPED RTTIILFGDG AGAAIIGASD EPGIISTHIY 
ADGRQGDLLK CAFPPRQGET SEAVGFMTMK GNDVFKVAVT QLSHVVTETL RLNNIDKSEI 
DWLVPHQANF RIINATAKKL DMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL 
LLLEAFGAGF AWGSALVRF