Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2774 |
Symbol | fabF-1 |
ID | 1170474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2896330 |
End bp | 2897568 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637344603 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
Protein accession | NP_718355 |
Protein GI | 24374312 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTAAAC GTCGTGTAGT GGTAACCGGT TTAGGGTTAG TAACGCCCGT GGGCAATACT GTCGACACAA CTTGGAAAGC CCTGCTTTCG GGTAAGAGTG GGATTGCGCC CATAACCAAA TTTGATGCCA GCGAATTCAC CACTCGTTTC AGTGGTTCTG TAAAAGATTT CGATGTTGAG CAGTACTTAA CCAAAAAAGA CGCCCGCAAA ATGGACCTCT TTATTCAGTA TGGTATGGCT GCAGGCATCC AAGCTATCCA AGACTCAGGT CTGGATATGA GCAAAGTAAA CCCAGGCCGC GTTGGTACCG CTATCGGTGC TGGTATGGGT GGAATGTGGT TGATTGAGCA AAATCACAGT GCGTTAATGA ACGGTGGTCC ACGTAAAATT TCGCCTTTCT TCGTGCCGAG CACCATCATT AATATGATTG CAGGCCATTT ATCGATTATG TACGGAATGA CAGGCCCTAA CTTTGCCGTC ACTACCGCCT GTACAACCGG TGTGCATAAT ATCGGTTTTG CGGCGCGCAC CATCGCCTAT GGTGATGCTG ACGTAATGGT TGCCGGTGGG GCGGAAGATG TCACGTGCCC ATTAGGTGTA GGTGGTTTTG GTGCAGCAAA AGCCCTCTCA ACTCGCAATG ATGATCCAAC TGCAGCGAGC CGTCCATGGG ATAAAGACCG TGATGGTTTT GTGATCGGTG ATGGCGCTGG TGTAATGGTG ATGGAAGAAT ACGAGCACGC TAAAGCGCGC GGTGCGACCA TTTATGGTGA ACTCGTTGGC TTTGGTATGA GCGGTGATGC TTTCCATATG ACCTCGCCAC CAAGTGATGG TGCGGGTGCC GCAGCGGCTA TGGTCAATGC CGTTAATGAT GCTAAGCTAC CACTTGAGAA AATTGGCTAT ATCAATGCCC ATGGCACTTC AACCCCCGCA GGTGATAAAG CGGAAGCGGC GGCGGTTAAG TCGGTCTTTG GTGATCACGC TTATAATCTG CTTGTGAGTT CGACTAAGTC GATGACGGGT CACCTATTAG GTGCTGCGGG CGCGGTGGAG GCGATTTTCA CTTTATTGGC ACTACGTGAC CAAGCGGTAC CACCGACCAT TAACCTCGAT AATCCTGACG AAGGGTGTGA TTTAGACTTT GTGGCACACA CTGCCCGCGA TGTGAAGTTA GATTACGCTC TATGTAACTC CTTCGGCTTT GGTGGAACTA ACGGTTCATT ACTGTTTAAG AAAGTCTAA
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Protein sequence | MSKRRVVVTG LGLVTPVGNT VDTTWKALLS GKSGIAPITK FDASEFTTRF SGSVKDFDVE QYLTKKDARK MDLFIQYGMA AGIQAIQDSG LDMSKVNPGR VGTAIGAGMG GMWLIEQNHS ALMNGGPRKI SPFFVPSTII NMIAGHLSIM YGMTGPNFAV TTACTTGVHN IGFAARTIAY GDADVMVAGG AEDVTCPLGV GGFGAAKALS TRNDDPTAAS RPWDKDRDGF VIGDGAGVMV MEEYEHAKAR GATIYGELVG FGMSGDAFHM TSPPSDGAGA AAAMVNAVND AKLPLEKIGY INAHGTSTPA GDKAEAAAVK SVFGDHAYNL LVSSTKSMTG HLLGAAGAVE AIFTLLALRD QAVPPTINLD NPDEGCDLDF VAHTARDVKL DYALCNSFGF GGTNGSLLFK KV
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