Gene SO_2772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2772 
Symbol 
ID1170472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2895188 
End bp2895667 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content47% 
IMG OID637344601 
Productcytosolic long-chain acyl-CoA thioester hydrolase family protein 
Protein accessionNP_718353 
Protein GI24374310 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTA TCGATAGACA AATTACCCTG AGATTTTTGT CAGAGCCTGC GGATGTGAAT 
TTTGGTGGTA AGGTTCACGG TGGCGCTGTG ATGAAATGGA TTGACCTTGC AGCCTATGCC 
TGTGCTGCGG GGTGGAGTGG TAAATATTGT ATTACCGCTT ACGCAGGTGG TATTCGATTT 
GTTCAACCGA TTTTAGTGGG CAACATTGTC GAAGTTAGCG CGAAGGTGAT TTATACCGGT 
AAAACCTCTA TGCATATTGG TATCGATGTG CGGGCCGGCG ATCCTAAGGT TTCAGAGCGG 
CATCTTACGA CTCACTGTAT TGTCATCATG GTTGCAGTCG ATGAACAAGG TCAGCCCACG 
CCAGTACCTG AGTGGGTGCC ACAGACTGAA AATGATATTC ACCTTCGAGA TTCTGCACTG 
CGCTTAATGG AGATGCGTAA GAAAATTGGT GCCGAAATGG AAGCCCATGT ACAGAAATAA
 
Protein sequence
MAGIDRQITL RFLSEPADVN FGGKVHGGAV MKWIDLAAYA CAAGWSGKYC ITAYAGGIRF 
VQPILVGNIV EVSAKVIYTG KTSMHIGIDV RAGDPKVSER HLTTHCIVIM VAVDEQGQPT 
PVPEWVPQTE NDIHLRDSAL RLMEMRKKIG AEMEAHVQK