Gene SO_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2769 
Symbol 
ID1170470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2893074 
End bp2893922 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content48% 
IMG OID637344599 
Producthypothetical protein 
Protein accessionNP_718350 
Protein GI24374307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCTG TTACCACCAA AAAACACGCA AACGGGCTCG ATTATGTCGA AGTGAACACG 
GCATTATGCC AAGCGAGAAT TTTTTTACAG GGCGCGCAAA TCGACCATTT TCAACCTGTC
GGTAAGCCCC CATTGTTATG GGTTTCCTCC GCCGATGACT ATCAACCCGG AAATGGGATC
CGTGGTGGTG TACCTGTATG TTGGCCATGG TTTGGCATGA GCAGTGAAGC CAATTTCCCA
CAACACGGTT TTGCTCGCAC CCGAGTTTGG GCGCTAGAAT CAGTTGAGAT GCGTAATCAA
TTGGTGGATT TGCGTTTCAG CTTAACCATC AGCGAAGAAG ATAAGGTCTT TTGGCCGCAC
AATACCCAAG TCAACGTACT CTTTACCTTA GGTGAAACGT TAAGTATCAG CTTGATTAAT
ACCAACCTTG GTGATGTACC CGTGAGCCTC ACTCAAGCGC TACACAGCTA TTTTCCGATT
GAAGATATTC ACCAGCTTAA AGCGACAGGA TTTAGCGGTG CTCAATATAT TGAGTTTGCT
AAAGGCCCAT ACCCGCAAAC CACAGATGAC GTGTTATTTG ACCGTGAAAC CGACCGCGTT
TACACCAACC TAGGCCCAGT ACAACACTTA CATACGCCAA AAGGTATAAT TGAAGTAAGC
CGTGAGAATA GCCGCTCGGC GGTGCTGTGG AACCCGTGGA TTGAAAAATC GACCCGGCTT
GCCCGCTTCA ATGACAATGA CTATCTGACC ATGGTGTGTT TAGAAGCCGC CAATGTGCTT
GAAGATAAGC TCACTCTCGC TCCTGGTGAA AGCCACAGCC TTATCACCCA TATTCGCTGG
GCAGACTAA
 
Protein sequence
MGSVTTKKHA NGLDYVEVNT ALCQARIFLQ GAQIDHFQPV GKPPLLWVSS ADDYQPGNGI 
RGGVPVCWPW FGMSSEANFP QHGFARTRVW ALESVEMRNQ LVDLRFSLTI SEEDKVFWPH
NTQVNVLFTL GETLSISLIN TNLGDVPVSL TQALHSYFPI EDIHQLKATG FSGAQYIEFA
KGPYPQTTDD VLFDRETDRV YTNLGPVQHL HTPKGIIEVS RENSRSAVLW NPWIEKSTRL
ARFNDNDYLT MVCLEAANVL EDKLTLAPGE SHSLITHIRW AD