| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2762 |
|---|
| Symbol | |
|---|
| ID | 1170463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2884602 |
|---|
| End bp | 2885348 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637344593 |
|---|
| Product | UMP phosphatase |
|---|
| Protein accession | NP_718344 |
|---|
| Protein GI | 24374301 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TTATCTGCGA TATCGATGGT GTACTACTGC ACGACAATAA ACTGATCCCC
GGCAGCGATA AATTTATTCA GCGCATTCTC GAGCAAGGCA ATCCCCTTGT TATTCTCACC
AACTATCCGG TGCAAACGGG CAAAGATCTG CAAAATCGCC TCAGCGCCGC AGGAATCGAC
GTGCCCGAAG AATGTTTTTA CACCTCGGCG ATGGCCACCG CCGACTTTTT AAAGCACCAA
GAAGGCAGCA AAGCCTTTGT GATCGGTGAA GGCGCCCTCA CCCATGAACT CTATAAAGCC
GGTTTTACCA TTACCGACAT TAATCCCGAC TTCGTGATTG TCGGCGAAAC CCGCTCCTAT
AACTGGGATA TGATCCATAA AGCCGCCGGA TTCGTCGCCC GTGGCGCCCG TTTTATCGCC
ACCAATCCCG ACACCCATGG CCCCGCTTAC AGTCCCGCCT GCGGCGCCCT GTGTTCGCCC
ATTGAACGAA TTACTGGTAA AAAACCCTTC TATGTAGGCA AACCAAGTTC ATGGATTATC
CGTTCCGCTC TCAATCATAT TGATGGTCAC TCCGAAAATA CGGTGATCAT CGGCGACAAT
ATGCGCACCG ATATTCTGGC GGGCTTTCAA GCAGGACTTG AAACCATTCT GGTCACCAGC
GGTGTAAGTA AGCTTGAAGA TATCGATAAA GAGCCTTTCC GCCCGAACCA TGTGTTTGCC
TGCGCTGGCG ATATCGATGT GGTTTAA
|
|---|
| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDKFIQRIL EQGNPLVILT NYPVQTGKDL QNRLSAAGID
VPEECFYTSA MATADFLKHQ EGSKAFVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWDMIHKAAG FVARGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSSWII
RSALNHIDGH SENTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA
CAGDIDVV
|
|---|
| |