Gene SO_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2755 
Symbolrnt 
ID1170456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2877122 
End bp2877790 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content47% 
IMG OID637344587 
Productribonuclease T 
Protein accessionNP_718338 
Protein GI24374295 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TTTGCGACGC AAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTA 
GTGATAGATG TCGAAACGGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT GGAAATAGCC 
GTCACGCTGC TGAAAATGGA TGATGAAGGC TTGCTAGGGA TTGATAAAAC CCTGCATTTT 
CATATAGAAC CCTTTGAGGG CGCCAACCTA GAACCCGAAG CTCTGGCCTT TAATGGTATT 
GATCCCACGA ATCCGTTAAG GGGGGCGGTC AGCGAAAAAG ACGCTTTTTT AGAGATTTTT 
AAAGCCGTTA AAAAAGCCCA AAAAGCATCC GATTGTCACC GCAGCATTAT TGTGGCGCAC 
AATGCCGCAT TCGATCATGG CTTTGTCAGT AAAGCTATCG AACGCTGTGA CTTAAAGCGA 
TCGCCCTTCC ATCCGTTTGC GACTTTTGAT ACTGCAACTT TGGCTGGATT AGCGATTGGC 
CATACGGTAC TGGCCAAAGC GTGCATTATG GCGGGCATTC CCTTCGATAA TAAAGAAGCC 
CATTCTGCAC TCTATGATAC TGAGCGCACC GCAGAACTCT TTTGTTATAT CGTCAACCGT 
TGGAAAACCT TAGGGGGTTG GCCACTATTA GCCACCAGCG AATCTGAAGA TATGGATAGC 
GAAGAATAG
 
Protein sequence
MSDICDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG LLGIDKTLHF 
HIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKDAFLEIF KAVKKAQKAS DCHRSIIVAH 
NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA 
HSALYDTERT AELFCYIVNR WKTLGGWPLL ATSESEDMDS EE