Gene SO_2747 details

Gene Information

• Locus tag: SO_2747
• Symbol: pal
• ID: 1170447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2868611
• End bp: 2869144
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637344579
• Product: peptidoglycan-associated lipoprotein
• Protein accession: NP_718331
• Protein GI: 24374288
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTGA ACAAGTTGTT AAAAGCTATG TTGGTAGCAC TTCCAATTAT GGCTATTAGT 
GCGTGTAGCT CAACTTCTGA ATCAGAAACT GATGCTATGG GCTCGACTAG CGGTTCTGGT 
AGTGAACTCA ATGGTGGTGT TCAAACCGGC GGTATTGGTG GAATGTTGTC ACCTGAAGAG 
CAACAACGTC AGGAACTCGA GCAGTTGAGA AAAGAGCATA TCATTTACTT CGATTTCGAC 
CGCAGTGAAG TTCAAACTGA ATATGCAGCG GTACTCGAAG CTCACGGTAC TTACTTAGTA 
GAGCACCCAA GTGTACGAGT ATTGATTGAA GGTCATGCCG ACGAGCGTGG TACGCCAGAA 
TACAACATCG CACTAGGTGA GCGTCGTGCT AAAGCTGTTG CTAAATACTT ACAAGGTATG 
GGTGTACAAC CAAGCCAAAT GAGCATCGTA AGCTACGGCG AAGAGAAGCC ACTTGACTTT 
ACTCGTACCG ATGAAGGTTT TGCTAAAAAC CGTCGTGCAG TTTTAGTTTA CTAA 

 

Protein sequence

MDLNKLLKAM LVALPIMAIS ACSSTSESET DAMGSTSGSG SELNGGVQTG GIGGMLSPEE 
QQRQELEQLR KEHIIYFDFD RSEVQTEYAA VLEAHGTYLV EHPSVRVLIE GHADERGTPE 
YNIALGERRA KAVAKYLQGM GVQPSQMSIV SYGEEKPLDF TRTDEGFAKN RRAVLVY