Gene SO_2739 details

Gene Information

• Locus tag: SO_2739
• Symbol: bioF
• ID: 1170437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2854284
• End bp: 2855489
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637344561
• Product: 8-amino-7-oxononanoate synthase
• Protein accession: NP_718323
• Protein GI: 24374280
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes
• TIGRFAM ID: [TIGR00858] 8-amino-7-oxononanoate synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCAT CACTCGAGTC AAAACTGGCT TCAAAAATCC GCGCTCGTCA GCAAGCCTTA 
GCAGAGCAAG GTTTGCTAAG GCAGCGTCAA GCATTATCAA TCGATGCCGT GCTAAGTGAC 
GCTGAGCCGC AGTTTTGCTT TGAGGGGCAA ACTTATCTTA ATTTCAGCAG TAACGACTAC 
TTAGGGCTTT CTCGTGCGCC CGAATTGATT GCGGCGCTAC ACCGCGGCGC ACAGCAATAC 
GGCGTAGGCA GCGGGGCATC GCCACTGGTG ACGGGTTACA GTGAGGCGCA TTTAGCGCTA 
GAAACCAAAC TGTGTAAGAT AACCGGATTT GAGGCAGCGT TACTGTTTAG CTCAGGGTTT 
AGCGCTAATA CCACGCTCTG TAAAACCCTG TTCGATAAGC AAGATGTCGT GCTGGCGGAT 
AAACTCGTCC ATGCATCGAT TATTGATGGT TTGCGCGATA GTGGCGCAGA TTTTAAACGC 
TTTTTGCACA ACTCAACTGA GAGTGCGGAG CGGCTGTTAG CCAAAAACAC GGTTTCAGCG 
CTGATCACTG AAAGTGTATT TAGCATGGAT GGTGATATTG CGCCGATTAA GGCCTTATCT 
AGCCTTTGCC GCGCGCATAA TGTGTGGTTG ATTGTCGATG ATGCCCATGG CTTTGGCGTG 
TCTGATATTT TTAATCAGCC AGCAGCCAAC CTTATCGATA TCCAGATAGT GACTTTTGGC 
AAGGCATTAG GCTGTCAAGG CGCAGCAATT CTGGGTAGTC GAGAGTTGAT TGCGTTTTTA 
GTGAGTAATG CGCGGGAATA TATTTATTCC ACTGCACTGT CACCGGCCAA TGCTGCGCTA 
GCTTTGGCCG CAGTTGAACA CTGTGAAGCT CAACCTGAAC TTAGGCAAAA GTTGCAGCGT 
AATATCTCGC TGTTCAAACA GTTATGCCAA GATGCTGATA TTCCACTTCT TGGTAGTGAC 
ACCCCGATTC AACCTCTGAT CATTGGCGAT GCCAAGCAAA CCTTATTGGT TGCGCAAAAG 
CTAAAAGCCA TGGGGATTTG GGTTGGGGCA ATTCGTCCGC CAACCGTGCC CGTAGGCTCA 
GCAAGATTAC GTATTACCTT AAGTGCATCC CATAGCGAGG CGGCAATTCG GCGCTGCGTT 
AACGGCATTA CGCAAGTGCT GGCCGAGTGT GTGCTGCCGA GGGTGTCTGA GCGGCCTGAA 
CGGTAA 

 

Protein sequence

MSSSLESKLA SKIRARQQAL AEQGLLRQRQ ALSIDAVLSD AEPQFCFEGQ TYLNFSSNDY 
LGLSRAPELI AALHRGAQQY GVGSGASPLV TGYSEAHLAL ETKLCKITGF EAALLFSSGF 
SANTTLCKTL FDKQDVVLAD KLVHASIIDG LRDSGADFKR FLHNSTESAE RLLAKNTVSA 
LITESVFSMD GDIAPIKALS SLCRAHNVWL IVDDAHGFGV SDIFNQPAAN LIDIQIVTFG 
KALGCQGAAI LGSRELIAFL VSNAREYIYS TALSPANAAL ALAAVEHCEA QPELRQKLQR 
NISLFKQLCQ DADIPLLGSD TPIQPLIIGD AKQTLLVAQK LKAMGIWVGA IRPPTVPVGS 
ARLRITLSAS HSEAAIRRCV NGITQVLAEC VLPRVSERPE R