Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2738 |
Symbol | bioC |
ID | 1170436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2853336 |
End bp | 2854163 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344560 |
Product | biotin synthesis protein BioC |
Protein accession | NP_718322 |
Protein GI | 24374279 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATGC CGCTTGGCGT GAGTGTTAAT TCCCATCAAT CTGCCAGTCA GGTCGAGCAT ATTGCCGATC GGTTTTCTGC TGCTGCCAAG CACTATCAAG AGCATAACTG TTTACAGCGT TTAAGCGGTG CGAGTTTGTT GCAGGGATTT GTTGCCAAAG GCGCAATTCT CGATATTGGC GCAGGGCCGG GGACTGATTT CGCTAACCGA GCAATGGGCG AGGAGATGAG GGTTTATGCA CTCGATATCG CTTTGGGCAT GCTGCAACAG CTTAAAACGA TTTACCCTGA GCACCAGTGT GTTTGCGGCA ATGCCGAGCA ATTACCCTTT GTAGATAGGA GTATCGATTG TATTTACTCC AATTTGGCTC TGCAGTGGTG CCATGATTTT TCAGCGGCAA CCAGCGAAAT GGCCAGAGTC TTAAAATCGG GTGGAGAAGC TCACCTGAGT ATCGTGGCAG CAGGCAGCCT GGCTCAGTTA TCTAATCTTG GTTTGAGGGT AAATGGTTTC TTATCTCTTG AAAGCTTACA AGCGGCATTT GACGACACAG ATTGGCAATT TCTTGATGTG AAGCTCATGC CAATGACCGT CTATTTTCAA GATCTTAAAG CCTTACTCTA TTCCATTAAA GGCGTGGGCG CATCGGTGCA ATCCTCAGTA CAGACAGTAA CTTCTTCTGA ATCCGATGCC CATTTTGGTA AATTGCGTGG CCGCCACGAT TGGCAGGCTT TACAACAACG AGCAGAGCAA TTTCGTGAGG CACAGGGCTT GCCTTTAACC TATCAGATCG CCCAATTTCG TGTGCGTCGC CAAGGCGGCT CGGTATAA
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Protein sequence | MSMPLGVSVN SHQSASQVEH IADRFSAAAK HYQEHNCLQR LSGASLLQGF VAKGAILDIG AGPGTDFANR AMGEEMRVYA LDIALGMLQQ LKTIYPEHQC VCGNAEQLPF VDRSIDCIYS NLALQWCHDF SAATSEMARV LKSGGEAHLS IVAAGSLAQL SNLGLRVNGF LSLESLQAAF DDTDWQFLDV KLMPMTVYFQ DLKALLYSIK GVGASVQSSV QTVTSSESDA HFGKLRGRHD WQALQQRAEQ FREAQGLPLT YQIAQFRVRR QGGSV
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