| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2724 |
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| Symbol | |
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| ID | 1170423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2840371 |
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| End bp | 2842137 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344547 |
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| Product | protease, putative |
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| Protein accession | NP_718308 |
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| Protein GI | 24374265 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACT ATCACATCAT CCCCGTCGAT CCTAAGGCGC ATTTATTTGC CGTCACCATG
ACGGTGCAAA AGCCCCTACC CACCCAAGTA TTCAGCCTGC CCGCTTGGCT TCCTGGCAGT
TATATGGTGC GGGATTTTGC CAAGAATATT ATCGAGCTCA AAGCCACAGG CAATGATGGA
GAGGCGCTTA AACTCACTCA GCTTGATAAA CAAACCTGGT CAGTCGACCA GCACTGCGAG
CAAATTACCC TGACCTATCA AGTCTATGCT TGGGACTTAT CGGTTCGCAC CGCGCATCTG
GATATGACCC ACGGCTTCTT TAACGGCAGC AGTGTGTTTT TGGCCGCCCA TGGATTTGAA
GCAAGCCTAC ACAGAGTCAC AATGCAAGCG CCCACAGAAC ACGCCTTAAA CGAGTGGCGC
CTTGCCACCA GCATGACACG TCAAAGCGGT GATGAATTTG CCTTTGGGGA CTTTTGTGCC
GAAAGCTATG ACGATCTTAT CGACCATCCA GTCGAAATGG GTCTGTTCAC ACACGCCAGT
TTTGAAGCCT GCGGCGTCAG ACACGATATC GTGTTAAACG GTCGCCACCG CGCTCATATG
CCTAGACTTT GCCAAGATTT AAAAGCGATT TGCGAATATC AAATCAAGCT GTTTGGTACG
CCTGCGCCCT TTGAGCGTTA TCTGTTTATG ACCACAGTGC TCGACAATGG CTTTGGCGGT
TTAGAACATC GATCATCGAC CGCATTAATG TGTTCGCGCA AGGACTTACC GCTGTCGATG
GATGCGCCGT TCAATAACGA CTATCGCACC TATTTATCGC TCTGCAGCCA TGAGTATTTC
CATAGCTGGA ATGTCAAGCG CATCAAGCCC GAATGCTTCT TACCCTACCA ACTCGAGGCG
GAAACCTATA CCCCACAGCT ATGGGCCTAT GAGGGTATCA CCTCCTATTA CGATGACTTC
CTCACCTACC GCGCAGGATT AGTGGATGAG CAAAGCTACT TGGATATGTT AAGTGAAACC
TTTACTAGGG TGTATCGCAG TCAAGGCCGC TTTAAGCAAA GTATTAAAGA TTCAAGCTTT
AACGCTTGGA CTAAGTTCTA CAAGCAGGAT GAAAACGCCC AAAACGCCAT TATCAGTTAT
TACACTAAGG GGGCCCTGTT TGCCCTGTAT CTCGACTTAA CCCTAAGAAG CGAGACGCTG
GGTAAGCACA ATCTCGATGA TCTGATGACG ATTCTATGGC AGGAATATGC GCTGCAAAAT
CGTGGCACCA CAGACGAATG TCATCAAAAA ATTGTTGAGC GCTTACTGGA GCGTGATTGT
CAGGACCTGT TCGCCTATTT AGACAATACC GACGATATCC CTCTCGCTAC GCTGCTCGCC
GAGTTTGGTG TGGAGTTTAC CTTACGCACG AGCAATGGGG CACAGGATGT GGGCGGTGGC
ACAATCAAAG GTTATGAGAT TGCCTTTGGT GCTAAAACAC AAGCGACACC AATGGGTCTA
AAAATCACCA CAGTTGCCCA AGGCAGTCCG GCGCACCTTG CGGGGTTAAG CGCCGGAGAT
ATCTTAATTG CTGCAGATAA TCTACAAGTG ACAAGCCAAT TTGAAGCCCA GCTTCAACAA
TATCCGCTCG GACAAAGCTT GACCCTACAT TGGTTTAGAC GAGATGAACT CATGACGGGC
GAACTAACTA TTGCCGCAGC ACCCAAAGAT ACCGTTGCGT TAACTATCAC CGATAAAACG
AAACTGAAGG CTTGGTTAGG GCGCTAG
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| Protein sequence | MIHYHIIPVD PKAHLFAVTM TVQKPLPTQV FSLPAWLPGS YMVRDFAKNI IELKATGNDG
EALKLTQLDK QTWSVDQHCE QITLTYQVYA WDLSVRTAHL DMTHGFFNGS SVFLAAHGFE
ASLHRVTMQA PTEHALNEWR LATSMTRQSG DEFAFGDFCA ESYDDLIDHP VEMGLFTHAS
FEACGVRHDI VLNGRHRAHM PRLCQDLKAI CEYQIKLFGT PAPFERYLFM TTVLDNGFGG
LEHRSSTALM CSRKDLPLSM DAPFNNDYRT YLSLCSHEYF HSWNVKRIKP ECFLPYQLEA
ETYTPQLWAY EGITSYYDDF LTYRAGLVDE QSYLDMLSET FTRVYRSQGR FKQSIKDSSF
NAWTKFYKQD ENAQNAIISY YTKGALFALY LDLTLRSETL GKHNLDDLMT ILWQEYALQN
RGTTDECHQK IVERLLERDC QDLFAYLDNT DDIPLATLLA EFGVEFTLRT SNGAQDVGGG
TIKGYEIAFG AKTQATPMGL KITTVAQGSP AHLAGLSAGD ILIAADNLQV TSQFEAQLQQ
YPLGQSLTLH WFRRDELMTG ELTIAAAPKD TVALTITDKT KLKAWLGR
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