| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2719 |
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| Symbol | deoD-3 |
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| ID | 1170418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2837111 |
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| End bp | 2837815 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344542 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | NP_718303 |
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| Protein GI | 24374260 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGCTC ATATTAATGC TCAACCCACT GATTTTGCTG AAACTGTTAT TATGCCAGGC
GATCCACTGC GGGCGAAATA TATCGCTGAA ACCTATCTTA CGGATGCCGT AGAAGTGACT
AACGTTCGCA ATATGCTGGG TTACACAGGC TATTACCAAG GGCAACGTAT TTCGGTGATG
GGCCATGGCA TGGGTATTTC ATCTATGGTG CTTTATGGTC ATGAGTTAAT TAATTTTTTT
GGCGTGAAAC GCATTATTCG TATCGGTAGT TTAGGGGCGA CCCAACAGCA TGTCGAAATG
CGCGATGTGA TTTTAGCTCA AGCCGCAGGC ACAGATTCCC CGACGAATGC TAAACGCAGC
AGTGGCTACC ATATGGCGAC CTCAGCCACC TTTTCCTTAC TGCACAAAGC CTATACCAAA
GCCAATGAAA AAGGCATTAG CGTGAAAGTT GGCAACGTAT TTAGTGGCGA TCTTTATTAT
GATCCTGACG AAGATATGAT CCCTGCGCTT GAGCGTTTCG GGGTATTAGG TATTGATATG
GAAGTGGCTG GACTTTATGG CTTAGCACAC CAACAGGGTA TTGAATCGTT AGCCATTCTG
ACGGTGTCGG ACCACTGTTT AACGGGTGAA GAAACCACGG CGCAAGAGCG GCAGTTATCT
TTCAATAATA TGATTGAACT CGCCTTAGAA ACCGCACTTA ATTAG
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| Protein sequence | MTAHINAQPT DFAETVIMPG DPLRAKYIAE TYLTDAVEVT NVRNMLGYTG YYQGQRISVM
GHGMGISSMV LYGHELINFF GVKRIIRIGS LGATQQHVEM RDVILAQAAG TDSPTNAKRS
SGYHMATSAT FSLLHKAYTK ANEKGISVKV GNVFSGDLYY DPDEDMIPAL ERFGVLGIDM
EVAGLYGLAH QQGIESLAIL TVSDHCLTGE ETTAQERQLS FNNMIELALE TALN
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