Gene SO_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2718 
Symbol 
ID1170417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2835906 
End bp2837060 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content40% 
IMG OID637344541 
Producthypothetical protein 
Protein accessionNP_718302 
Protein GI24374259 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA AAATCACCTT AACCGCGATT AGTTTTCTCG CTAACTTTAT TATGGCGGGT 
TTTGCAACTC AATTTGGGAT GCTGATTGAA CCTATTGCGG ATAAATTTTC AGCAAACGTA
AATGACGTTG CCTCCATATT CTCCTTGCTT AATGGTGGCG CATTGGCGGG AACTATTGCT
GCTTTTTTCT TTATTGAAAA ATTGGGTATC AAGCGAATTA CCTTAATTAG TTACAGCCTA
GTGGCATTGT GTGCTGTCGC GTTACATCTT ACCCCTTCGC TAAAAGTAGT GATGGTCGCC
ATGACGTTAA TTGGTTTTTG TGGCGGTGTA GGCTTATGTA TTGCGGGTAC GATAGTGGTA
TCTGTGTGGC AAGAGAAATT ACAAAGCACC ATGCTCGTCG TTCAAGATGC CACGTTTAAT
ATTGCTGGGG TTATTTTCCC TTTAATCACA ACTTACGCAC TCACAAGTTC ATTGTCATGG
AGTTACAGTT ACTTAGCCGT AGGTTTAGTC GCGTTAGGAA CCGTGATTAT TACCTTGTTC
ACTAATTTTT CGCTATGTGA GCAATCATCG AATACGGAAG ATAAGCAACA ATCGGAATGG
AATTTCGGCA TTATTAGCGG TGGCATAGGG CTGTTTTTAG GCATGCTAGC ACTCTATACG
TTTTTAACGT GGGCCCCTTT ATTTGTTAAG CAAAAATTTG ATATTCCATT TGAAGAAGCG
GGCAATATTA TTACCCAATA TTGGTCTGCT GCATTGATTG GTGCGTTAAT TTCGACGCTG
ATTGTGACTC GGGTAAAAAT TCACCATTTC TTAGTTGGGA TTATCGGCCT TGCCATGGTC
ATCACTTTCA TGATTGTGAC GACCGATAAG CTTCATTGGA TGAGTTATTT AACCTATGGT
TATGGCTTTG TGTGTGCAGC CCTTTACAAC GCATTTATTG CTTATGGTGT GTCTTTTGTT
AAAAAGGCCA GCAGTAAAAA TGTGTCCTAT ATTCTGATTA GTGGCAGTAC CGGCGCCATG
TTTAGTCCCG CCATTAGCTC ATTCTTTGAA CGCATTATTG GTTTGCAAAC TGTGATGTAT
GTCATTCCGC TATTATATGT AGCGATATTT ATTATGTTGA TTGTTTCAGG TCGAATGAAG
TCTGCAACGG CATAA
 
Protein sequence
MNNKITLTAI SFLANFIMAG FATQFGMLIE PIADKFSANV NDVASIFSLL NGGALAGTIA 
AFFFIEKLGI KRITLISYSL VALCAVALHL TPSLKVVMVA MTLIGFCGGV GLCIAGTIVV
SVWQEKLQST MLVVQDATFN IAGVIFPLIT TYALTSSLSW SYSYLAVGLV ALGTVIITLF
TNFSLCEQSS NTEDKQQSEW NFGIISGGIG LFLGMLALYT FLTWAPLFVK QKFDIPFEEA
GNIITQYWSA ALIGALISTL IVTRVKIHHF LVGIIGLAMV ITFMIVTTDK LHWMSYLTYG
YGFVCAALYN AFIAYGVSFV KKASSKNVSY ILISGSTGAM FSPAISSFFE RIIGLQTVMY
VIPLLYVAIF IMLIVSGRMK SATA