Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2718 |
Symbol | |
ID | 1170417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2835906 |
End bp | 2837060 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637344541 |
Product | hypothetical protein |
Protein accession | NP_718302 |
Protein GI | 24374259 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AAATCACCTT AACCGCGATT AGTTTTCTCG CTAACTTTAT TATGGCGGGT TTTGCAACTC AATTTGGGAT GCTGATTGAA CCTATTGCGG ATAAATTTTC AGCAAACGTA AATGACGTTG CCTCCATATT CTCCTTGCTT AATGGTGGCG CATTGGCGGG AACTATTGCT GCTTTTTTCT TTATTGAAAA ATTGGGTATC AAGCGAATTA CCTTAATTAG TTACAGCCTA GTGGCATTGT GTGCTGTCGC GTTACATCTT ACCCCTTCGC TAAAAGTAGT GATGGTCGCC ATGACGTTAA TTGGTTTTTG TGGCGGTGTA GGCTTATGTA TTGCGGGTAC GATAGTGGTA TCTGTGTGGC AAGAGAAATT ACAAAGCACC ATGCTCGTCG TTCAAGATGC CACGTTTAAT ATTGCTGGGG TTATTTTCCC TTTAATCACA ACTTACGCAC TCACAAGTTC ATTGTCATGG AGTTACAGTT ACTTAGCCGT AGGTTTAGTC GCGTTAGGAA CCGTGATTAT TACCTTGTTC ACTAATTTTT CGCTATGTGA GCAATCATCG AATACGGAAG ATAAGCAACA ATCGGAATGG AATTTCGGCA TTATTAGCGG TGGCATAGGG CTGTTTTTAG GCATGCTAGC ACTCTATACG TTTTTAACGT GGGCCCCTTT ATTTGTTAAG CAAAAATTTG ATATTCCATT TGAAGAAGCG GGCAATATTA TTACCCAATA TTGGTCTGCT GCATTGATTG GTGCGTTAAT TTCGACGCTG ATTGTGACTC GGGTAAAAAT TCACCATTTC TTAGTTGGGA TTATCGGCCT TGCCATGGTC ATCACTTTCA TGATTGTGAC GACCGATAAG CTTCATTGGA TGAGTTATTT AACCTATGGT TATGGCTTTG TGTGTGCAGC CCTTTACAAC GCATTTATTG CTTATGGTGT GTCTTTTGTT AAAAAGGCCA GCAGTAAAAA TGTGTCCTAT ATTCTGATTA GTGGCAGTAC CGGCGCCATG TTTAGTCCCG CCATTAGCTC ATTCTTTGAA CGCATTATTG GTTTGCAAAC TGTGATGTAT GTCATTCCGC TATTATATGT AGCGATATTT ATTATGTTGA TTGTTTCAGG TCGAATGAAG TCTGCAACGG CATAA
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Protein sequence | MNNKITLTAI SFLANFIMAG FATQFGMLIE PIADKFSANV NDVASIFSLL NGGALAGTIA AFFFIEKLGI KRITLISYSL VALCAVALHL TPSLKVVMVA MTLIGFCGGV GLCIAGTIVV SVWQEKLQST MLVVQDATFN IAGVIFPLIT TYALTSSLSW SYSYLAVGLV ALGTVIITLF TNFSLCEQSS NTEDKQQSEW NFGIISGGIG LFLGMLALYT FLTWAPLFVK QKFDIPFEEA GNIITQYWSA ALIGALISTL IVTRVKIHHF LVGIIGLAMV ITFMIVTTDK LHWMSYLTYG YGFVCAALYN AFIAYGVSFV KKASSKNVSY ILISGSTGAM FSPAISSFFE RIIGLQTVMY VIPLLYVAIF IMLIVSGRMK SATA
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