Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2704 |
Symbol | |
ID | 1170405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2821109 |
End bp | 2822836 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637344529 |
Product | prophage MuSo2, tail fiber protein, putative |
Protein accession | NP_718288 |
Protein GI | 24374245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCCTT TACGCAACGG TTCGCAAGCA ACAGCAAGAC CAGCAATAAA GCCTTTAATT GGCACTGCTG GTTGGTTCAC TGAGTCTGGT GATAACAACG TCCCAAGCTA CCCAGGTGCA GATTGGTTTA ACCATGTGAT CGCAGAGTTT CAGAATGCCT TGGCTGAGAT GGGGGTTACG TTTGATCCAA CAAAAGACGA CCATTTACAA ATCATATTTG CATACTTTAA GGATTATCTT GAACAGATAG GCATGACTGT AAGTGATAAT GAGCAGGTAC TACAGACATT GTTTTCAGCA AGTGTTGTCC CTGCAAAATT CACTGCTGCG GCACTTTCAT TTTTCAACTC TAAAAAATCT ACTTCAATTT TAGGGGATTC AATTACCCAT GGTGCGTTTT CAGGCAATTT ATTTAGCAAT GGATGGGCTA GGCTTTTTGC AAGAGCACTT AATGCAGAAT ATGGCTCATC TAGCTATGGA TTTACTCCGT TTTTAACGCT TGGAACTGGT CCAAATTTAA GCATAGATGT ACATAATGTA TCCATCTCTG CCGGTTGGGT TAATTTTGAT AGTAATAATG CTGAGTCAGT AGTAACTGGG CAGTTTTTTA GATCGCAGGC AAGTGGAAAT ACTATTTCTT TCAATTTACC TACTTTTATG CCTCGGGGTA AGCTGCATTT TGTTAAAAAG CCAACCGGTG GTACTTTTGA TGTTTCGATA AATGGAGTAG TTACAAACAC CGTTGATACA AATGGTGTTT TAGATGAATT TTCATCTGTA GAGTTTGCAT TAACCGATAA TGGCTTAGGT TCATGCACGG TTTTAATCAC CACAACAAGC ACTAATGATG TTGATTTTTT TGGTATTTCT TACCTTAGTT CGTCTTTGGA AACTGTATGC CATAATTTTA GCATCTCAGG CCGTCGGCTT AGATATGTTG GTGATAATGT GTTACAAACC GTCTGCGAAA ATTCACACAC TCTTATCATG GCTTTAGGCC ACAACGATTA TGGCGAAACC GATTTGTCTT ATCAAAATTC AGTATCTGCT AAAATTGATT TTTTGATAGA GCAAGTTAAT GCTAACAAGG TGTTAGTAGT AGTTCCTGAT TTTTGTTGGT CAGCGGATAA AAACAATTGG ATGAGAGTTT TGCTTAAAAA ATTAGCGACT CAAACTAATG GTGTTTATGT GGATCTGCCA TCTTCTCTGT TGAAAAATGA TGGCTCTCCA GCTGATTCTA ACCATTTGAT TAACGTTTTA GGTATGTGGG TTGATGGTAG TCATCCAAAT GAGAGAGGAA ATGCTTGGGT ATTTGAGATG ATAGGTAAAG CTATGAAGCT ATCATGTACT AGCAAAGTCC AGACATTGGG AAATCATGAT TATCGAGTAC CTTTACAGTT GTCTCCTGCT GTATCAATTA AAAACTCACT AACTACTACC CTGTCATCGG TTGTTAGAAG TGGAAATGCA TTGTTGTTAA ATTTTTATAT AACTAAAAAT ACAGTAGAGC CAATTCCAGT AGGGCAATAT GTCTTATGTT CCGGATGGCC TGATAGGTTT GATTTCTCTG GGATACAAGG CTCAGTTTTT CCTGTCATGC AAATCGACGG TTCTACTATT ATTGGTGGTG TTGTTGTTAG TGCTTCTGGT GAGGTAGTCC TAAATATCAC TTCCTTATCA GTGTATAACG ATCTTTATTT CCAAGTAGCA GTAGCTAGAA ACAAATAA
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Protein sequence | MHPLRNGSQA TARPAIKPLI GTAGWFTESG DNNVPSYPGA DWFNHVIAEF QNALAEMGVT FDPTKDDHLQ IIFAYFKDYL EQIGMTVSDN EQVLQTLFSA SVVPAKFTAA ALSFFNSKKS TSILGDSITH GAFSGNLFSN GWARLFARAL NAEYGSSSYG FTPFLTLGTG PNLSIDVHNV SISAGWVNFD SNNAESVVTG QFFRSQASGN TISFNLPTFM PRGKLHFVKK PTGGTFDVSI NGVVTNTVDT NGVLDEFSSV EFALTDNGLG SCTVLITTTS TNDVDFFGIS YLSSSLETVC HNFSISGRRL RYVGDNVLQT VCENSHTLIM ALGHNDYGET DLSYQNSVSA KIDFLIEQVN ANKVLVVVPD FCWSADKNNW MRVLLKKLAT QTNGVYVDLP SSLLKNDGSP ADSNHLINVL GMWVDGSHPN ERGNAWVFEM IGKAMKLSCT SKVQTLGNHD YRVPLQLSPA VSIKNSLTTT LSSVVRSGNA LLLNFYITKN TVEPIPVGQY VLCSGWPDRF DFSGIQGSVF PVMQIDGSTI IGGVVVSASG EVVLNITSLS VYNDLYFQVA VARNK
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