Gene SO_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2702 
Symbol 
ID1170403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2819407 
End bp2820474 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content50% 
IMG OID637344527 
Producthypothetical protein 
Protein accessionNP_718286 
Protein GI24374243 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTATA ACGTACCAAC GCTACGATCA CTTATTGAAA GCGGTTTAAT CGACATTGAA 
GCGTCGTTAG ATACCATTCT GCCTAAGTTT GGTATTGAGC AGGCGCTGAA TACCTCGGTA 
AGCGCCTCAG TGCGCGACCT ATATGATTAC CAAAGCTGGA TAGTGCGGCA GATCATCCCA 
TCGAATGAGT CAGAAGACCA AACCATTATT GATACTGCAC GCTATGAAGG CGTGATCCAA 
AAGCTTGCCA GTAGCGCAGC TGGCCCCGTG ACGTTCGCGG GTAATGTGGT AATCCCTGTT 
GATACTGTGA TGACCCATGC AGATGGCCGC TTATATCGCG TAACGCTATC GAATACGCCG 
TCAGGCGGCA ATGTGGTGGT GCAAGTTGAA GCGGAAGCAG CAGGTGCCGC AGGCAACCTT 
GTTGCTGGCG AAACGCTTAC GCTAATTTCG ACAGTGCCAG GCATTCAACC TAATGGCATT 
AGTGGCGGCT TAATTGGCGG TGCCGATCTC GAAACACCGG CTAAAGTACT CGAGCGTTTA 
TTGTTCCGTA AGCGCAAACC GCCAACAGGG TCCTCTGTGC ATGACTATGT GGGCTGGTGT 
CGTGAAGTGG CAGGCGTAAA TCGCGCTTGG GCGATTGATT ACTACCAAGG GCCTGCAACG 
GTTGGTTATG CGTTTGTTTT TGATGACCGA GTGGATATCT TGCCAACGTA TCAAGACCAA 
GTGGCAATGG CTGATTATAT CTATCGCCAT CCCGACCCAG CCACAGGGGA CGATGTTGGT 
CGCCCTGGTG GCATTGAGGC GGTATATATT CCGCTCACGC TGAAAACGAC TAATCTTGCG 
ATCACTATTA CTCCTGATAA TGCCGATTTA CGCGATAGCG TAACCGCGAG TATTCAAGGT 
TATTTTAAAA CCTTAAGCCC GGGTTCAACT CTATTACTAA GCGCAGTTCG CACGGCAATA 
GGTTCAACCA TTGGTGTGAC TGATTACACC TTGGATTTAG CCGCAGATGT TACCGCCACT 
ACCACCGAGC TACACGCATT AGGAGCCATT ACATGGGGCA CTCCGTAG
 
Protein sequence
MPYNVPTLRS LIESGLIDIE ASLDTILPKF GIEQALNTSV SASVRDLYDY QSWIVRQIIP 
SNESEDQTII DTARYEGVIQ KLASSAAGPV TFAGNVVIPV DTVMTHADGR LYRVTLSNTP 
SGGNVVVQVE AEAAGAAGNL VAGETLTLIS TVPGIQPNGI SGGLIGGADL ETPAKVLERL 
LFRKRKPPTG SSVHDYVGWC REVAGVNRAW AIDYYQGPAT VGYAFVFDDR VDILPTYQDQ 
VAMADYIYRH PDPATGDDVG RPGGIEAVYI PLTLKTTNLA ITITPDNADL RDSVTASIQG 
YFKTLSPGST LLLSAVRTAI GSTIGVTDYT LDLAADVTAT TTELHALGAI TWGTP