Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2681 |
Symbol | |
ID | 1170383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2805070 |
End bp | 2805858 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637344507 |
Product | prophage MuSo2, F protein, putative |
Protein accession | NP_718265 |
Protein GI | 24374222 |
COG category | [S] Function unknown |
COG ID | [COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAGA TGGCTGATCC ATTAGTCCCC AAGGAGGCGC TTGAATGGTT TAAAAGTAAA GGCATTAAGC CTGGCTTCGA CTACCGCGAT GTATGGAAGG AAGAACAAGC CAATGCGTTT ACCGTGGCCA AGATGCTAAA TGCCGATTTA CTGGTTGAGG TTAAGCAGCT GGTTGAAGAT GCCATTGGCC AAGGCCAAAC CTTTGAGCAG TTCCGCGATA TCCTTAAACC GCTGCTCGTT AAGTCGGGTT GGTGGGGCGT GCAGACCATG CAAGATCCAT TAACCGACGA AACCAAGCTA GTGCAACTTG GTAGCGAAGG CCGCATCAAA ACCATTTATA AAACCAACAT GCGCACCGCT CGCAGCGCTG GCCAGTGGGA ACGAATCCAG CGCACTAAGC GCACTATGCC TTATTTGCTG TATCAACTGG GGCCAAGCGA GCAGCACCGC ATCGAGCACT TAAAATGGAA TAACACCTTG TTGCCTGCTG ATGATCCATG GTGGGATGTG CATATGACGC CCAACGGTTG GGGCTGCAAA TGTTGGATAC GGCAAGTATC ACAGTATGAA GCCGATAAAC TTATCGCCGC AGGCACAGTT AAAACCACAG TACCCGCCAG CAAAAACAAG CAATGGGTAA ACCGTCGCAC CGGCGAAGTT GAAGTACTGC CGGAAGGAAT TGATCCAGGA TGGAACTATA ACCCAGGTAA AAACCGTGAA AAGATGTTAG CCGCCGACCT CGCTTTAAAA GAGTCGCGAA TGCGTCAAAC GCTCGCTAAC GGCTCTTAA
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Protein sequence | MRKMADPLVP KEALEWFKSK GIKPGFDYRD VWKEEQANAF TVAKMLNADL LVEVKQLVED AIGQGQTFEQ FRDILKPLLV KSGWWGVQTM QDPLTDETKL VQLGSEGRIK TIYKTNMRTA RSAGQWERIQ RTKRTMPYLL YQLGPSEQHR IEHLKWNNTL LPADDPWWDV HMTPNGWGCK CWIRQVSQYE ADKLIAAGTV KTTVPASKNK QWVNRRTGEV EVLPEGIDPG WNYNPGKNRE KMLAADLALK ESRMRQTLAN GS
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