Gene SO_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2647 
Symbol 
ID1170348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2784575 
End bp2785006 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content46% 
IMG OID637344472 
Productcytosolic long-chain acyl-CoA thioester hydrolase family protein 
Protein accessionNP_718231 
Protein GI24374188 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACATA CACTCGACTC TACCCGCCCA ACTTTTTCAG ATGCCATCGA ACAGCGGATA 
AATCAATCCG AAGCGCGGGT GATTAAAGCC GTATTTCCTT CCATTACCAA TCACCACAAT
ACCTTATTTG GTGGTGAAGC CTTAGCGTGG ATGGATGAAA CTGCCTTTAT TGCTGCTACT
CGTTTTTGCC GTAAAACCTT AGTCACTGTC AGCTCAGATA GAATCGACTT TAAAAAACCG
ATCCCAGCCG GGACGTTAGC CGAACTCATA GCCCGCGTGA TCCACGTCGG TAATACATCG
TTAAAAGTCG AAGTGAATAT TTTTGTCGAA GACATGTATC AAGATCACCG AGAACATGCC
ATTCGGGGTG TGTTCACCTT TGTTGCGGTT GACGAACAAC GCCATCCAAC ACAAGTGTGG
ACGGCTGAAT AA
 
Protein sequence
MPHTLDSTRP TFSDAIEQRI NQSEARVIKA VFPSITNHHN TLFGGEALAW MDETAFIAAT 
RFCRKTLVTV SSDRIDFKKP IPAGTLAELI ARVIHVGNTS LKVEVNIFVE DMYQDHREHA
IRGVFTFVAV DEQRHPTQVW TAE