Gene SO_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2646 
SymbolaroH 
ID1170347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2783354 
End bp2784418 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content48% 
IMG OID637344471 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionNP_718230 
Protein GI24374187 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA AAACAGACGA ATTACGCACT TCCTTATTAG CTAAAGTCAT CTCACCTGCA 
CAACTGGCAT CTGAGTACCC CTTAACCCAA GATGCTGCCG ACTACCTCGT TCAACAACGT 
CGTGAAGTTG AAGCCATCAT TATGGGCGAA GACCAACGCC TGTTGGTGAT CATTGGCCCT 
TGCTCTATCC ACGATACGCA AGCCGCCCTC GATTACGCCC GCCGCTTAGC AGTGCTACAT 
CAAGAGTTAA AGGACGACCT CTGTATTTTA ATGCGAGTGT ATTTTGAAAA GCCGCGCACG 
ATTGTGGGTT GGAAGGGGTT GATTTCCGAT CCTGACTTAG ATGGCAGCTT CGAGCCAAAT 
AAAGGATTGC GTATTGCACG CCAGCTTCTA CAGCAAATCA CTGAGCTTAA GCTGCCCATC 
GCTACCGAAT TTTTAGATAT GGTGAACGGG CAATATATTG CCGATTTAAT CACCTGGGGC 
GCGATTGGTG CTCGCACCAC CGAAAGCCAA GTACACCGTG AAATGGCCTC AGCCCTTTCT 
TGCCCTGTGG GCTTTAAAAA CGGAACCGAT GGCAATATTA ATATCGCCGT TGATGCGGTA 
CGTGCCGCAA AAGTGCCGCA TATCTTCTAC TCACCGGATA AAGATGGTGC GATGTCTGTC 
TATCGCACCC ATGGTAATCC TTACGGACAC ATCATTTTAC GTGGCGGTAA AAAACCCAAT 
TACTTTGAGC AAGACATTGA ACAAGCAAGA TTAAAACTTG AGTCTGTCAA TGTTACACCG 
CGTGTGGTGG TTGATTTTAG CCACGGAAAT AGTGAAAAAA ATCACCTAAA ACAACTGGTC 
GTTGCTGAAA ATATCATGGC GCAAATGCGT GCTGGTAGTA CGGCCATTGC CGGCATCATG 
GCCGAAAGTT TCTTACAAGA AGGCAACCAA AAGGTGATTG AAGGTCAACC CCTATGTTAT 
GGCCAAAGCA TCACGGATGC CTGCTTACAT TGGGCTGACT CCGAAAAATT ACTGCGAGAT 
CTTGCCAGCG CCTCACGCGA TAGACGCGAA CTCCTTGGCA AATAA
 
Protein sequence
MTIKTDELRT SLLAKVISPA QLASEYPLTQ DAADYLVQQR REVEAIIMGE DQRLLVIIGP 
CSIHDTQAAL DYARRLAVLH QELKDDLCIL MRVYFEKPRT IVGWKGLISD PDLDGSFEPN 
KGLRIARQLL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ VHREMASALS 
CPVGFKNGTD GNINIAVDAV RAAKVPHIFY SPDKDGAMSV YRTHGNPYGH IILRGGKKPN 
YFEQDIEQAR LKLESVNVTP RVVVDFSHGN SEKNHLKQLV VAENIMAQMR AGSTAIAGIM 
AESFLQEGNQ KVIEGQPLCY GQSITDACLH WADSEKLLRD LASASRDRRE LLGK